Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1952

Experiment: methylglyoxal 0.0016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.0016 vol%
2,068,727	+		Psest_1950	0.77	-0.7
2,068,728	-		Psest_1950	0.77	-0.7
2,068,772	+		Psest_1950	0.80	-0.7
2,068,772	+		Psest_1950	0.80	+0.9
2,068,773	-		Psest_1950	0.80	-0.1
2,068,773	-		Psest_1950	0.80	-0.8
2,068,773	-		Psest_1950	0.80	+1.0
2,068,804	+		Psest_1950	0.82	+0.9
2,068,804	+		Psest_1950	0.82	+0.1
2,068,805	-		Psest_1950	0.82	-0.1
2,068,805	-		Psest_1950	0.82	+1.9
2,068,805	-		Psest_1950	0.82	-0.7
2,068,823	+		Psest_1950	0.83	+0.7
2,068,823	+		Psest_1950	0.83	+0.2
2,068,824	-		Psest_1950	0.83	-2.3
2,068,824	-		Psest_1950	0.83	+0.1
2,068,824	-		Psest_1950	0.83	+1.7
2,068,824	-		Psest_1950	0.83	-0.8
2,068,824	-		Psest_1950	0.83	-1.1
2,068,991	-				+1.4
2,068,991	-				+0.7
2,069,043	+				-0.2
2,069,043	+				+0.6
2,069,043	+				-0.3
2,069,044	-				+0.8
2,069,069	+				+0.3
2,069,069	+				+0.8
2,069,069	+				+0.5
2,069,069	+				-1.7
2,069,070	-				-1.0
2,069,070	-				-0.0
2,069,201	+				+0.0
2,069,202	-				+0.4
2,069,202	-				+0.3
2,069,210	+				-3.2
2,069,210	+				+1.1
2,069,210	+				+0.3
2,069,212	+				-0.2
2,069,212	+				+1.2
2,069,213	-				-1.4
2,069,232	+				-1.2
2,069,232	+				+1.2
2,069,232	+				+0.6
2,069,233	-				-1.4
2,069,234	+				-0.1
2,069,234	+				-0.2
2,069,234	+				+0.7
2,069,234	+				+0.0
2,069,234	+				-1.7
2,069,234	+				+0.5
2,069,234	+				-1.5
2,069,234	+				-0.1
2,069,234	+				-1.7
2,069,235	-				-0.5
2,069,235	-				-0.5
2,069,235	-				-2.0
2,069,235	-				-1.0
2,069,235	-				-0.3
2,069,235	-				-0.3
2,069,235	-				-1.0
2,069,322	-				+0.2
2,069,509	-		Psest_1951	0.49	-2.5
2,069,509	-		Psest_1951	0.49	+1.0
2,069,622	+		Psest_1951	0.82	+1.4
2,069,682	+				+0.5
2,069,683	-				-0.3
2,069,990	+		Psest_1952	0.29	-1.5
2,069,991	-		Psest_1952	0.30	-0.5
2,069,991	-		Psest_1952	0.30	-4.7
2,069,991	-		Psest_1952	0.30	-3.7
2,070,124	-		Psest_1952	0.42	-1.5
2,070,161	+		Psest_1952	0.45	-1.3
2,070,252	-		Psest_1952	0.53	-1.3
2,070,252	-		Psest_1952	0.53	-0.3
2,070,351	+		Psest_1952	0.63	-3.8
2,070,386	-		Psest_1952	0.66	-1.4
2,070,468	-		Psest_1952	0.73	-1.5
2,070,561	+		Psest_1952	0.82	-1.3
2,070,814	+				-1.7
2,070,814	+				+1.1
2,070,988	-		Psest_1953	0.17	+0.1
2,070,988	-		Psest_1953	0.17	-1.7
2,070,988	-		Psest_1953	0.17	-1.7
2,071,004	-		Psest_1953	0.18	-1.4
2,071,078	-		Psest_1953	0.23	-0.5
2,071,210	-		Psest_1953	0.33	+1.7
2,071,210	-		Psest_1953	0.33	+0.5
2,071,210	-		Psest_1953	0.33	-3.1
2,071,258	+		Psest_1953	0.37	+0.4
2,071,258	+		Psest_1953	0.37	-1.3
2,071,259	-		Psest_1953	0.37	+1.4
2,071,259	-		Psest_1953	0.37	+2.0
2,071,281	+		Psest_1953	0.39	-0.9
2,071,282	-		Psest_1953	0.39	+0.6
2,071,282	-		Psest_1953	0.39	-1.4
2,071,282	-		Psest_1953	0.39	-0.5
2,071,388	+		Psest_1953	0.47	-3.2
2,071,388	+		Psest_1953	0.47	-4.2
2,071,389	-		Psest_1953	0.47	-0.3
2,071,393	+		Psest_1953	0.47	+1.2
2,071,393	+		Psest_1953	0.47	-3.4
2,071,393	+		Psest_1953	0.47	-2.5
2,071,394	-		Psest_1953	0.47	-2.7
2,071,546	+		Psest_1953	0.59	-4.3
2,071,551	+		Psest_1953	0.59	-1.3
2,071,551	+		Psest_1953	0.59	-0.7
2,071,551	+		Psest_1953	0.59	-3.6
2,071,551	+		Psest_1953	0.59	+0.3
2,071,551	+		Psest_1953	0.59	-1.9
2,071,551	+		Psest_1953	0.59	+0.1
2,071,551	+		Psest_1953	0.59	-0.2
2,071,551	+		Psest_1953	0.59	-0.4
2,071,551	+		Psest_1953	0.59	+0.4
2,071,551	+		Psest_1953	0.59	-0.2
2,071,552	-		Psest_1953	0.59	+0.2
2,071,552	-		Psest_1953	0.59	-0.3
2,071,552	-		Psest_1953	0.59	-1.8
2,071,552	-		Psest_1953	0.59	+0.1
2,071,552	-		Psest_1953	0.59	-0.1
2,071,552	-		Psest_1953	0.59	+0.7
2,071,555	+		Psest_1953	0.59	+0.0
2,071,555	+		Psest_1953	0.59	+1.4
2,071,556	-		Psest_1953	0.59	-2.4
2,071,556	-		Psest_1953	0.59	-0.7
2,071,556	-		Psest_1953	0.59	-3.3
2,071,556	-		Psest_1953	0.59	-1.4
2,071,573	+		Psest_1953	0.61	+1.1
2,071,573	+		Psest_1953	0.61	+0.4
2,071,573	+		Psest_1953	0.61	+1.2
2,071,574	-		Psest_1953	0.61	+1.1
2,071,574	-		Psest_1953	0.61	-0.9
2,071,574	-		Psest_1953	0.61	-2.4
2,071,574	-		Psest_1953	0.61	-1.1
2,071,606	+		Psest_1953	0.63	-0.3