Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1949

Experiment: methylglyoxal 0.0016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.0016 vol%
2,064,465	+		Psest_1947	0.75	-3.0
2,064,653	+				-2.5
2,064,653	+				-1.7
2,064,657	+				-1.5
2,064,657	+				-2.8
2,064,657	+				-2.1
2,064,657	+				-3.5
2,064,658	-				-2.5
2,064,767	-				+0.8
2,064,847	+		Psest_1948	0.13	-2.7
2,064,848	-		Psest_1948	0.14	-3.5
2,064,971	+		Psest_1948	0.71	-0.1
2,064,971	+		Psest_1948	0.71	-1.4
2,064,971	+		Psest_1948	0.71	+0.4
2,064,971	+		Psest_1948	0.71	-1.1
2,064,971	+		Psest_1948	0.71	+1.1
2,064,971	+		Psest_1948	0.71	+0.3
2,064,971	+		Psest_1948	0.71	+1.6
2,064,971	+		Psest_1948	0.71	+0.4
2,064,971	+		Psest_1948	0.71	-1.0
2,064,971	+		Psest_1948	0.71	+0.9
2,064,971	+		Psest_1948	0.71	+0.4
2,064,971	+		Psest_1948	0.71	+0.4
2,064,971	+		Psest_1948	0.71	-2.4
2,064,971	+		Psest_1948	0.71	+0.5
2,064,971	+		Psest_1948	0.71	-0.1
2,064,971	+		Psest_1948	0.71	-0.5
2,064,971	+		Psest_1948	0.71	-1.6
2,064,972	-		Psest_1948	0.71	-1.8
2,064,972	-		Psest_1948	0.71	-2.8
2,064,972	-		Psest_1948	0.71	+0.3
2,064,972	-		Psest_1948	0.71	+1.9
2,064,972	-		Psest_1948	0.71	+1.7
2,064,972	-		Psest_1948	0.71	+0.0
2,064,972	-		Psest_1948	0.71	-0.9
2,064,972	-		Psest_1948	0.71	-2.1
2,064,972	-		Psest_1948	0.71	-0.3
2,064,972	-		Psest_1948	0.71	-0.2
2,064,972	-		Psest_1948	0.71	-0.4
2,064,972	-		Psest_1948	0.71	+0.7
2,065,094	+				+0.8
2,065,103	+				+0.3
2,065,103	+				-0.4
2,065,104	-				-2.8
2,065,213	+				-2.3
2,065,213	+				-0.3
2,065,213	+				-1.5
2,065,213	+				-1.6
2,065,213	+				+0.3
2,065,213	+				-1.5
2,065,213	+				+2.2
2,065,214	-				-0.5
2,065,214	-				-0.6
2,065,214	-				-0.7
2,065,214	-				-4.4
2,065,214	-				-0.9
2,065,227	-				-1.5
2,065,251	+				-0.6
2,065,251	+				+0.5
2,065,500	+				+0.3
2,065,501	-				-2.7
2,065,782	+		Psest_1949	0.18	-0.2
2,065,783	-		Psest_1949	0.18	+0.6
2,065,821	-		Psest_1949	0.20	-1.8
2,066,013	+		Psest_1949	0.29	-0.9
2,066,024	+		Psest_1949	0.29	+0.0
2,066,024	+		Psest_1949	0.29	-2.0
2,066,025	-		Psest_1949	0.29	+0.7
2,066,105	+		Psest_1949	0.33	-1.0
2,066,105	+		Psest_1949	0.33	+0.1
2,066,105	+		Psest_1949	0.33	-1.1
2,066,106	-		Psest_1949	0.33	-1.2
2,066,106	-		Psest_1949	0.33	-3.0
2,066,540	+		Psest_1949	0.53	+0.4
2,066,599	-		Psest_1949	0.55	-1.0
2,066,599	-		Psest_1949	0.55	-0.4
2,066,732	-		Psest_1949	0.62	-3.0
2,066,732	-		Psest_1949	0.62	-3.7
2,066,800	+		Psest_1949	0.65	-0.5
2,067,000	-		Psest_1949	0.74	-2.7
2,067,000	-		Psest_1949	0.74	-0.4
2,067,020	-		Psest_1949	0.75	-0.4
2,067,112	+		Psest_1949	0.79	+1.2
2,067,187	+		Psest_1949	0.82	-2.0
2,067,187	+		Psest_1949	0.82	-3.7
2,067,187	+		Psest_1949	0.82	+0.0
2,067,207	+		Psest_1949	0.83	-1.2
2,067,260	+		Psest_1949	0.86	-2.9
2,067,260	+		Psest_1949	0.86	+0.8
2,067,260	+		Psest_1949	0.86	-1.9
2,067,260	+		Psest_1949	0.86	-0.3
2,067,260	+		Psest_1949	0.86	-2.3
2,067,260	+		Psest_1949	0.86	-0.2
2,067,260	+		Psest_1949	0.86	+0.3
2,067,260	+		Psest_1949	0.86	+0.6
2,067,261	-		Psest_1949	0.86	-1.5
2,067,424	+				+0.7
2,067,424	+				+0.1
2,067,424	+				-2.0
2,067,424	+				+0.0
2,067,424	+				+0.1
2,067,424	+				+0.6
2,067,644	+				+0.1
2,067,645	-				-0.2
2,067,819	+		Psest_1950	0.14	+0.4
2,067,819	+		Psest_1950	0.14	+0.6
2,067,819	+		Psest_1950	0.14	-0.4
2,067,819	+		Psest_1950	0.14	-0.9
2,067,820	-		Psest_1950	0.14	+0.3
2,067,820	-		Psest_1950	0.14	+0.7
2,067,820	-		Psest_1950	0.14	+1.4
2,067,820	-		Psest_1950	0.14	+0.0
2,067,820	-		Psest_1950	0.14	-0.0
2,067,820	-		Psest_1950	0.14	-3.8
2,067,820	-		Psest_1950	0.14	+0.2
2,067,820	-		Psest_1950	0.14	-0.5
2,067,820	-		Psest_1950	0.14	-0.6
2,067,820	-		Psest_1950	0.14	-2.9
2,067,873	+		Psest_1950	0.18	+0.8
2,067,874	-		Psest_1950	0.18	+0.5
2,067,874	-		Psest_1950	0.18	+0.2
2,068,121	+		Psest_1950	0.35	-1.0
2,068,121	+		Psest_1950	0.35	+0.8
2,068,121	+		Psest_1950	0.35	-1.1
2,068,121	+		Psest_1950	0.35	+1.1
2,068,121	+		Psest_1950	0.35	+0.6
2,068,121	+		Psest_1950	0.35	-0.8
2,068,121	+		Psest_1950	0.35	+0.4
2,068,121	+		Psest_1950	0.35	-0.0
2,068,122	-		Psest_1950	0.35	-0.6
2,068,122	-		Psest_1950	0.35	-2.2
2,068,122	-		Psest_1950	0.35	+1.2
2,068,122	-		Psest_1950	0.35	+0.9
2,068,122	-		Psest_1950	0.35	+1.5
2,068,122	-		Psest_1950	0.35	-0.5
2,068,122	-		Psest_1950	0.35	+1.0
2,068,272	-		Psest_1950	0.45	-0.4
2,068,298	+		Psest_1950	0.47	-2.5
2,068,298	+		Psest_1950	0.47	+1.2
2,068,299	-		Psest_1950	0.47	-1.1
2,068,299	-		Psest_1950	0.47	-0.0
2,068,343	-		Psest_1950	0.50	+2.8
2,068,376	+		Psest_1950	0.53	-0.7
2,068,376	+		Psest_1950	0.53	+0.7
2,068,376	+		Psest_1950	0.53	+1.0
2,068,376	+		Psest_1950	0.53	+0.4
2,068,376	+		Psest_1950	0.53	-0.0
2,068,376	+		Psest_1950	0.53	-0.3
2,068,377	-		Psest_1950	0.53	+0.8
2,068,377	-		Psest_1950	0.53	+2.2
2,068,377	-		Psest_1950	0.53	+0.1
2,068,377	-		Psest_1950	0.53	+1.8
2,068,377	-		Psest_1950	0.53	+0.7
2,068,381	+		Psest_1950	0.53	+0.0
2,068,381	+		Psest_1950	0.53	+1.4
2,068,381	+		Psest_1950	0.53	-0.0
2,068,381	+		Psest_1950	0.53	-0.2
2,068,382	-		Psest_1950	0.53	-1.8
2,068,382	-		Psest_1950	0.53	+0.1
2,068,382	-		Psest_1950	0.53	+0.5
2,068,382	-		Psest_1950	0.53	+0.4
2,068,423	+		Psest_1950	0.56	+0.9