Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1887

Experiment: methylglyoxal 0.0016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.0016 vol%
1,995,210	+		Psest_1885	0.49	-1.3
1,995,316	+		Psest_1885	0.77	-0.7
1,995,317	-		Psest_1885	0.78	+1.0
1,995,317	-		Psest_1885	0.78	+1.8
1,995,346	-		Psest_1885	0.85	-0.6
1,995,346	-		Psest_1885	0.85	+1.2
1,995,412	-				+0.8
1,995,420	-				+1.3
1,995,459	-				+0.6
1,995,510	+		Psest_1886	0.11	-2.3
1,995,511	-		Psest_1886	0.11	-0.4
1,995,534	+		Psest_1886	0.19	-0.5
1,995,535	-		Psest_1886	0.19	+1.2
1,995,536	+		Psest_1886	0.20	-1.0
1,995,537	-		Psest_1886	0.20	+0.0
1,995,537	-		Psest_1886	0.20	+0.7
1,995,537	-		Psest_1886	0.20	-2.1
1,995,537	-		Psest_1886	0.20	-2.3
1,995,538	+		Psest_1886	0.20	-1.3
1,995,538	+		Psest_1886	0.20	-2.0
1,995,538	+		Psest_1886	0.20	-1.5
1,995,539	-		Psest_1886	0.21	+0.5
1,995,539	-		Psest_1886	0.21	+1.8
1,995,539	-		Psest_1886	0.21	-1.0
1,995,769	+				+0.3
1,995,809	-				-0.4
1,995,824	-				+0.5
1,995,909	-				+1.5
1,996,108	+				-1.1
1,996,175	+				-2.1
1,996,178	+				+0.2
1,996,178	+				+0.9
1,996,178	+				+2.0
1,996,178	+				+1.3
1,996,178	+				+0.3
1,996,245	+				-1.5
1,996,381	-		Psest_1887	0.23	-2.0
1,996,404	+		Psest_1887	0.26	+1.9
1,996,404	+		Psest_1887	0.26	+0.8
1,996,404	+		Psest_1887	0.26	+1.5
1,996,404	+		Psest_1887	0.26	+0.8
1,996,404	+		Psest_1887	0.26	+0.9
1,996,404	+		Psest_1887	0.26	-0.5
1,996,404	+		Psest_1887	0.26	+0.2
1,996,405	-		Psest_1887	0.26	+0.8
1,996,405	-		Psest_1887	0.26	-0.0
1,996,405	-		Psest_1887	0.26	+1.0
1,996,405	-		Psest_1887	0.26	+1.2
1,996,405	-		Psest_1887	0.26	+1.2
1,996,405	-		Psest_1887	0.26	+1.4
1,996,897	-		Psest_1887	0.83	+1.5
1,997,564	-		Psest_1888	0.81	+0.5
1,997,642	-				+0.4
1,997,642	-				+0.0
1,997,711	+				-1.5
1,997,712	-				-0.7
1,997,712	-				+0.4
1,997,712	-				-1.3
1,997,718	+				+1.2
1,997,718	+				+0.0
1,997,719	-				+0.5
1,997,719	-				+1.7
1,997,803	+				+1.0
1,997,803	+				+0.6
1,997,932	-		Psest_1889	0.17	-0.4
1,997,981	+		Psest_1889	0.21	-0.2