Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1846

Experiment: methylglyoxal 0.0016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.0016 vol%
1,951,367	+		Psest_1845	0.58	-1.0
1,951,367	+		Psest_1845	0.58	+0.9
1,951,368	-		Psest_1845	0.58	-0.3
1,951,368	-		Psest_1845	0.58	+0.9
1,951,411	-		Psest_1845	0.60	-0.7
1,951,411	-		Psest_1845	0.60	+0.9
1,951,411	-		Psest_1845	0.60	-0.3
1,951,522	-		Psest_1845	0.66	+0.2
1,951,522	-		Psest_1845	0.66	-0.4
1,951,732	+		Psest_1845	0.77	-0.9
1,951,733	-		Psest_1845	0.77	-0.3
1,951,733	-		Psest_1845	0.77	-1.8
1,951,733	-		Psest_1845	0.77	-0.3
1,951,960	-		Psest_1845	0.89	+0.5
1,952,279	+				-1.6
1,952,279	+				+0.5
1,952,283	+				+0.3
1,952,283	+				-0.4
1,952,283	+				+0.8
1,952,284	-				+0.7
1,952,284	-				-0.5
1,952,284	-				+0.9
1,952,284	-				-2.4
1,952,284	-				-3.4
1,952,284	-				-2.9
1,952,288	-				-0.4
1,952,396	+		Psest_1846	0.10	-3.0
1,952,551	-		Psest_1846	0.33	-4.3
1,952,566	-		Psest_1846	0.35	-1.1
1,952,591	+		Psest_1846	0.39	-0.9
1,952,591	+		Psest_1846	0.39	-1.1
1,952,591	+		Psest_1846	0.39	+0.3
1,952,592	-		Psest_1846	0.39	+0.4
1,952,592	-		Psest_1846	0.39	+0.4
1,952,592	-		Psest_1846	0.39	-0.4
1,952,942	+		Psest_1846	0.89	+0.3
1,952,942	+		Psest_1846	0.89	+0.5
1,952,943	-		Psest_1846	0.89	+0.1
1,952,943	-		Psest_1846	0.89	-1.3
1,952,943	-		Psest_1846	0.89	-1.4
1,953,068	-				+0.2
1,953,392	+		Psest_1847	0.74	-3.9
1,953,489	+				+0.6
1,953,489	+				+0.5
1,953,489	+				-0.3
1,953,489	+				-3.4
1,953,489	+				-0.3
1,953,489	+				-0.5
1,953,490	-				-0.5
1,953,490	-				+0.5
1,953,490	-				-2.8
1,953,490	-				+0.8
1,953,500	-				-0.0
1,953,589	+				-0.8
1,953,589	+				-0.2
1,953,589	+				-3.3
1,953,589	+				+0.9
1,953,589	+				+1.1
1,953,589	+				-0.3
1,953,591	+				-0.7
1,953,591	+				+0.8
1,953,592	-				+1.6
1,953,592	-				-0.6
1,953,592	-				-1.9
1,953,662	-				-1.3
1,953,662	-				+1.1
1,953,976	+		Psest_1848	0.57	-0.4
1,953,977	-		Psest_1848	0.57	-1.4
1,953,977	-		Psest_1848	0.57	+1.3
1,953,977	-		Psest_1848	0.57	-0.1
1,953,977	-		Psest_1848	0.57	-0.6
1,953,977	-		Psest_1848	0.57	-3.2
1,953,977	-		Psest_1848	0.57	+0.1
1,954,000	+		Psest_1848	0.62	-0.0
1,954,000	+		Psest_1848	0.62	+0.7
1,954,001	-		Psest_1848	0.62	+0.2