Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1519

Experiment: methylglyoxal 0.0016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.0016 vol%
1,616,983	+				-0.6
1,616,983	+				-2.1
1,617,118	+				+0.8
1,617,181	-		Psest_1518	0.52	-0.5
1,617,196	+		Psest_1518	0.69	+0.4
1,617,196	+		Psest_1518	0.69	+0.1
1,617,197	-		Psest_1518	0.70	-2.4
1,617,225	+				+0.2
1,617,225	+				-0.2
1,617,225	+				-1.9
1,617,225	+				-0.3
1,617,225	+				-2.4
1,617,225	+				-1.4
1,617,225	+				+0.7
1,617,225	+				-0.6
1,617,225	+				-1.8
1,617,226	-				+0.7
1,617,226	-				-0.5
1,617,226	-				+0.0
1,617,226	-				+0.4
1,617,226	-				+0.5
1,617,226	-				+0.6
1,617,226	-				-0.3
1,617,226	-				+0.5
1,617,231	+				-0.5
1,617,232	-				+0.5
1,617,232	-				+0.4
1,617,232	-				+0.1
1,617,427	+				-1.8
1,617,428	-				-0.1
1,617,449	+				-1.8
1,617,652	-		Psest_1519	0.11	+0.7
1,617,652	-		Psest_1519	0.11	-1.7
1,617,903	+		Psest_1519	0.22	+0.3
1,617,903	+		Psest_1519	0.22	+0.3
1,617,903	+		Psest_1519	0.22	+0.9
1,617,904	-		Psest_1519	0.22	-1.3
1,617,942	+		Psest_1519	0.23	+0.8
1,617,942	+		Psest_1519	0.23	-0.7
1,617,942	+		Psest_1519	0.23	+1.0
1,617,942	+		Psest_1519	0.23	-0.0
1,617,942	+		Psest_1519	0.23	-1.0
1,617,942	+		Psest_1519	0.23	-1.7
1,617,942	+		Psest_1519	0.23	+0.0
1,617,942	+		Psest_1519	0.23	-2.4
1,617,942	+		Psest_1519	0.23	+0.9
1,617,942	+		Psest_1519	0.23	-0.7
1,617,943	-		Psest_1519	0.23	-1.3
1,617,943	-		Psest_1519	0.23	+1.3
1,617,943	-		Psest_1519	0.23	+0.7
1,617,943	-		Psest_1519	0.23	-0.4
1,617,943	-		Psest_1519	0.23	+0.2
1,617,943	-		Psest_1519	0.23	+0.3
1,617,943	-		Psest_1519	0.23	-4.1
1,617,943	-		Psest_1519	0.23	+1.1
1,617,943	-		Psest_1519	0.23	+0.4
1,617,944	+		Psest_1519	0.23	+0.1
1,617,944	+		Psest_1519	0.23	+0.3
1,617,944	+		Psest_1519	0.23	-0.5
1,617,944	+		Psest_1519	0.23	+1.3
1,617,944	+		Psest_1519	0.23	+0.7
1,617,944	+		Psest_1519	0.23	+0.5
1,617,996	+		Psest_1519	0.26	-0.3
1,617,996	+		Psest_1519	0.26	-0.1
1,618,398	+		Psest_1519	0.42	+0.3
1,618,399	-		Psest_1519	0.42	+1.2
1,618,536	+		Psest_1519	0.48	-0.6
1,618,536	+		Psest_1519	0.48	+1.4
1,618,536	+		Psest_1519	0.48	-0.1
1,618,536	+		Psest_1519	0.48	-0.3
1,618,536	+		Psest_1519	0.48	+2.4
1,618,537	-		Psest_1519	0.48	-0.4
1,618,537	-		Psest_1519	0.48	-0.3
1,618,537	-		Psest_1519	0.48	+0.8
1,618,537	-		Psest_1519	0.48	-1.0
1,618,537	-		Psest_1519	0.48	-0.4
1,618,537	-		Psest_1519	0.48	-0.9
1,618,537	-		Psest_1519	0.48	-0.0
1,618,537	-		Psest_1519	0.48	-0.0
1,618,537	-		Psest_1519	0.48	+0.5
1,618,641	+		Psest_1519	0.53	-1.0
1,618,641	+		Psest_1519	0.53	-0.0
1,618,642	-		Psest_1519	0.53	-1.2
1,618,642	-		Psest_1519	0.53	+0.7
1,618,905	+		Psest_1519	0.64	-0.7
1,618,906	-		Psest_1519	0.64	-0.2
1,618,906	-		Psest_1519	0.64	+0.3
1,618,906	-		Psest_1519	0.64	-0.3
1,618,906	-		Psest_1519	0.64	-1.6
1,618,961	+		Psest_1519	0.66	+1.7
1,619,034	+		Psest_1519	0.69	+0.1
1,619,034	+		Psest_1519	0.69	-0.6
1,619,034	+		Psest_1519	0.69	-1.8
1,619,035	-		Psest_1519	0.69	-1.9
1,619,035	-		Psest_1519	0.69	+0.9
1,619,035	-		Psest_1519	0.69	+0.4
1,619,051	+		Psest_1519	0.70	-0.4
1,619,051	+		Psest_1519	0.70	-1.7
1,619,051	+		Psest_1519	0.70	-0.1
1,619,052	-		Psest_1519	0.70	+0.0
1,619,052	-		Psest_1519	0.70	-0.2
1,619,370	+		Psest_1519	0.83	-0.8
1,619,371	-		Psest_1519	0.83	-0.5
1,619,406	+		Psest_1519	0.85	-0.5
1,619,407	-		Psest_1519	0.85	-2.7
1,619,407	-		Psest_1519	0.85	+1.0
1,619,463	+		Psest_1519	0.87	+1.6
1,619,463	+		Psest_1519	0.87	+0.2
1,619,464	-		Psest_1519	0.87	-4.7
1,619,469	-		Psest_1519	0.88	+0.6
1,619,578	-				+1.5
1,619,601	+				+0.4
1,619,601	+				-0.7
1,619,601	+				-0.3
1,619,667	+				+0.2
1,619,667	+				+1.1
1,619,668	-				-1.8
1,619,668	-				-0.6
1,619,668	-				-0.6
1,619,835	+				-0.2
1,619,835	+				+0.1
1,619,835	+				-3.5
1,619,835	+				-1.5
1,619,835	+				+2.3
1,619,835	+				+0.7
1,619,835	+				+0.6
1,619,836	-				-1.9
1,619,836	-				-1.1
1,619,836	-				-0.8
1,619,866	+				+0.8
1,619,867	-		Psest_1520	0.10	-0.9
1,619,908	-		Psest_1520	0.23	+0.3
1,619,953	+		Psest_1520	0.38	-0.5
1,619,953	+		Psest_1520	0.38	-2.2
1,620,025	+		Psest_1520	0.61	-0.7
1,620,025	+		Psest_1520	0.61	-1.5
1,620,025	+		Psest_1520	0.61	-0.9
1,620,026	-		Psest_1520	0.61	-1.9
1,620,070	+		Psest_1520	0.76	+0.6
1,620,142	+				-1.0
1,620,142	+				+1.0
1,620,142	+				+1.1
1,620,142	+				+1.3
1,620,143	-				-4.2
1,620,143	-				-3.5
1,620,378	-		Psest_1521	0.51	-1.4
1,620,535	+				-3.9
1,620,536	-				+1.5
1,620,536	-				+0.1
1,620,612	+		Psest_1522	0.30	+2.4
1,620,612	+		Psest_1522	0.30	-0.8
1,620,612	+		Psest_1522	0.30	-0.0
1,620,612	+		Psest_1522	0.30	-0.1
1,620,689	-		Psest_1522	0.70	-0.4