Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1506

Experiment: methylglyoxal 0.0016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.0016 vol%
1,605,005	+		Psest_1504	0.84	-0.7
1,605,005	+		Psest_1504	0.84	+0.2
1,605,007	+		Psest_1504	0.84	-2.3
1,605,007	+		Psest_1504	0.84	-1.0
1,605,007	+		Psest_1504	0.84	-0.0
1,605,007	+		Psest_1504	0.84	-4.7
1,605,008	-		Psest_1504	0.85	-0.6
1,605,158	-				+0.7
1,605,256	-				-2.8
1,605,321	+		Psest_1505	0.15	-2.5
1,605,380	-		Psest_1505	0.23	-1.4
1,605,439	+		Psest_1505	0.32	-2.8
1,605,440	-		Psest_1505	0.32	-2.0
1,605,440	-		Psest_1505	0.32	-1.3
1,605,974	+				-3.2
1,605,974	+				-0.5
1,606,039	+		Psest_1506	0.13	-1.7
1,606,040	-		Psest_1506	0.13	-1.2
1,606,041	+		Psest_1506	0.14	-1.6
1,606,041	+		Psest_1506	0.14	-0.9
1,606,041	+		Psest_1506	0.14	-1.9
1,606,041	+		Psest_1506	0.14	-3.5
1,606,112	+		Psest_1506	0.24	-3.1
1,606,112	+		Psest_1506	0.24	-0.3
1,606,113	-		Psest_1506	0.24	-2.3
1,606,113	-		Psest_1506	0.24	-1.5
1,606,228	+		Psest_1506	0.41	-1.9
1,606,228	+		Psest_1506	0.41	+0.1
1,606,228	+		Psest_1506	0.41	-3.3
1,606,228	+		Psest_1506	0.41	-2.3
1,606,228	+		Psest_1506	0.41	-0.5
1,606,228	+		Psest_1506	0.41	-2.2
1,606,229	-		Psest_1506	0.41	-3.1
1,606,229	-		Psest_1506	0.41	-1.7
1,606,229	-		Psest_1506	0.41	-3.0
1,606,229	-		Psest_1506	0.41	-1.7
1,606,300	-		Psest_1506	0.52	-2.6
1,606,327	+		Psest_1506	0.56	+0.0
1,606,377	+		Psest_1506	0.63	-2.1
1,606,885	+				+0.5
1,606,885	+				-0.6
1,606,886	-				+2.1
1,606,897	+				-0.9
1,606,898	-				+1.1
1,606,922	+				+0.5
1,606,922	+				-1.7
1,606,922	+				+1.9
1,606,922	+				+0.9
1,606,923	-				+2.2
1,606,923	-				+0.2
1,606,925	+				+1.3
1,606,926	-				+1.1
1,606,926	-				+1.8
1,606,926	-				+0.1
1,606,950	+				+0.8
1,606,950	+				-0.4
1,606,951	-				+0.6
1,606,951	-				-0.8
1,606,953	+				-0.5
1,606,953	+				+0.4
1,606,953	+				-1.8
1,606,954	-				-1.7
1,606,954	-				+0.7
1,606,954	-				+1.1
1,606,954	-				+0.1
1,606,954	-				+2.0
1,606,954	-				+0.9
1,606,999	+				-1.1
1,607,000	-				-1.2
1,607,000	-				+0.1
1,607,000	-				-0.6
1,607,000	-				+2.5
1,607,168	+		Psest_1508	0.11	+0.7
1,607,168	+		Psest_1508	0.11	-0.3
1,607,169	-		Psest_1508	0.12	-1.5
1,607,169	-		Psest_1508	0.12	-0.3
1,607,169	-		Psest_1508	0.12	-2.3
1,607,169	-		Psest_1508	0.12	+1.1
1,607,530	+		Psest_1508	0.36	-0.9
1,607,530	+		Psest_1508	0.36	+0.3
1,607,530	+		Psest_1508	0.36	+1.0
1,607,530	+		Psest_1508	0.36	+2.5
1,607,530	+		Psest_1508	0.36	-2.3
1,607,530	+		Psest_1508	0.36	+1.9
1,607,530	+		Psest_1508	0.36	+0.3
1,607,530	+		Psest_1508	0.36	-0.2
1,607,530	+		Psest_1508	0.36	+1.4
1,607,531	-		Psest_1508	0.36	+1.3
1,607,531	-		Psest_1508	0.36	+2.2
1,607,531	-		Psest_1508	0.36	-1.1
1,607,531	-		Psest_1508	0.36	+1.6
1,607,531	-		Psest_1508	0.36	+0.0
1,607,531	-		Psest_1508	0.36	+0.7
1,607,531	-		Psest_1508	0.36	+0.1
1,607,531	-		Psest_1508	0.36	-0.8
1,607,531	-		Psest_1508	0.36	+1.1
1,607,531	-		Psest_1508	0.36	-1.5