Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1461

Experiment: methylglyoxal 0.0016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.0016 vol%
1,568,069	+				+1.1
1,568,070	-				-0.9
1,568,085	-				+1.3
1,568,158	+				-0.1
1,568,158	+				+0.7
1,568,158	+				-0.3
1,568,158	+				+0.3
1,568,158	+				+1.9
1,568,159	-				+0.6
1,568,159	-				-0.6
1,568,159	-				-0.4
1,568,159	-				+1.7
1,568,199	+				-0.6
1,568,199	+				-0.3
1,568,199	+				-2.9
1,568,199	+				+0.4
1,568,199	+				-0.5
1,568,199	+				+0.2
1,568,199	+				-1.6
1,568,199	+				-0.3
1,568,199	+				+0.2
1,568,199	+				-0.0
1,568,200	-				+0.0
1,568,200	-				+1.0
1,568,203	+				-0.9
1,568,203	+				+0.6
1,568,203	+				+0.0
1,568,203	+				-0.9
1,568,203	+				-0.6
1,568,203	+				-0.2
1,568,203	+				+0.8
1,568,204	-				-1.6
1,568,204	-				-0.3
1,568,204	-				-0.1
1,568,204	-				-1.6
1,568,204	-				+0.4
1,568,204	-				+0.5
1,568,204	-				+0.8
1,568,204	-				+0.9
1,568,204	-				+0.7
1,568,204	-				+1.0
1,568,204	-				-2.5
1,568,310	+		Psest_1460	0.13	-0.6
1,568,310	+		Psest_1460	0.13	+1.3
1,568,310	+		Psest_1460	0.13	-2.7
1,568,310	+		Psest_1460	0.13	-0.0
1,568,310	+		Psest_1460	0.13	+0.8
1,568,311	-		Psest_1460	0.13	-0.7
1,568,311	-		Psest_1460	0.13	-0.5
1,568,424	+		Psest_1460	0.30	-1.6
1,568,637	-		Psest_1460	0.63	+0.3
1,568,637	-		Psest_1460	0.63	-2.8
1,568,721	+		Psest_1460	0.76	-2.6
1,568,721	+		Psest_1460	0.76	-3.5
1,568,721	+		Psest_1460	0.76	-1.4
1,568,722	-		Psest_1460	0.76	+0.3
1,568,722	-		Psest_1460	0.76	-1.2
1,568,838	+				+0.5
1,568,838	+				+2.1
1,568,925	+				+1.9
1,568,926	-				-2.5
1,568,926	-				-2.2
1,568,926	-				+0.8
1,568,926	-				+0.4
1,568,999	+		Psest_1461	0.14	+2.7
1,569,000	-		Psest_1461	0.14	-1.4
1,569,092	+		Psest_1461	0.24	-0.7
1,569,093	-		Psest_1461	0.24	+0.7
1,569,105	-		Psest_1461	0.25	-0.2
1,569,194	+		Psest_1461	0.35	-2.2
1,569,194	+		Psest_1461	0.35	-1.8
1,569,195	-		Psest_1461	0.35	-0.5
1,569,234	-		Psest_1461	0.39	-0.0
1,569,323	+		Psest_1461	0.49	-2.5
1,569,323	+		Psest_1461	0.49	-1.1
1,569,323	+		Psest_1461	0.49	-0.4
1,569,324	-		Psest_1461	0.49	+0.1
1,569,329	+		Psest_1461	0.49	+1.2
1,569,437	+		Psest_1461	0.61	-0.5
1,569,437	+		Psest_1461	0.61	+0.1
1,569,437	+		Psest_1461	0.61	+1.0
1,569,437	+		Psest_1461	0.61	-1.0
1,569,437	+		Psest_1461	0.61	-0.6
1,569,438	-		Psest_1461	0.61	-2.7
1,569,438	-		Psest_1461	0.61	+0.2
1,569,500	+		Psest_1461	0.68	-0.1
1,569,501	-		Psest_1461	0.68	-1.0
1,569,501	-		Psest_1461	0.68	-0.9
1,569,501	-		Psest_1461	0.68	-0.8
1,569,722	+				-2.7
1,569,747	+				-1.4
1,569,747	+				-1.1
1,569,747	+				-3.8
1,569,747	+				-2.3
1,569,748	-				-3.0
1,569,748	-				-0.6
1,569,748	-				+0.3
1,569,748	-				+0.5
1,569,790	-				+0.0
1,569,790	-				-1.8
1,569,794	+				-1.1
1,569,795	-				-0.9
1,569,950	+				-3.3
1,569,950	+				-1.2
1,569,959	+				-0.3
1,569,959	+				-1.3
1,570,054	+				-1.7
1,570,054	+				+1.7
1,570,054	+				+0.3
1,570,054	+				+0.2
1,570,055	-				+0.7
1,570,055	-				-1.9
1,570,055	-				+0.0
1,570,055	-				-0.2
1,570,101	+				+1.6
1,570,102	-				-1.0
1,570,102	-				+1.1
1,570,102	-				+1.8
1,570,138	+				-3.4
1,570,138	+				+0.5
1,570,138	+				-0.4
1,570,138	+				-0.1
1,570,138	+				+1.4
1,570,138	+				+0.3
1,570,138	+				-0.9
1,570,139	-				-0.7
1,570,139	-				+2.5
1,570,139	-				+1.8
1,570,139	-				+1.5
1,570,139	-				-0.2
1,570,139	-				-0.1
1,570,139	-				-2.2
1,570,139	-				-0.1
1,570,139	-				-0.0
1,570,252	+		Psest_1462	0.18	+1.7
1,570,252	+		Psest_1462	0.18	-1.2
1,570,252	+		Psest_1462	0.18	+0.6
1,570,253	-		Psest_1462	0.18	+0.7
1,570,666	-		Psest_1462	0.55	-0.6
1,570,666	-		Psest_1462	0.55	-0.5