Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0119

Experiment: methylglyoxal 0.0016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.0016 vol%
114,603	+		Psest_0117	0.40	+0.3
114,604	-		Psest_0117	0.40	+3.3
114,604	-		Psest_0117	0.40	+1.6
114,777	+		Psest_0117	0.62	+1.6
114,778	-		Psest_0117	0.62	+0.5
114,778	-		Psest_0117	0.62	-0.7
114,778	-		Psest_0117	0.62	+1.3
114,778	-		Psest_0117	0.62	+0.3
114,778	-		Psest_0117	0.62	+1.4
114,907	+		Psest_0117	0.79	+0.3
114,907	+		Psest_0117	0.79	-1.7
114,907	+		Psest_0117	0.79	-0.7
114,907	+		Psest_0117	0.79	-0.6
114,907	+		Psest_0117	0.79	+0.3
114,908	-		Psest_0117	0.79	+1.3
114,908	-		Psest_0117	0.79	+0.1
114,908	-		Psest_0117	0.79	+0.7
114,908	-		Psest_0117	0.79	+0.7
114,908	-		Psest_0117	0.79	-2.1
114,908	-		Psest_0117	0.79	-0.0
115,325	+		Psest_0118	0.55	+1.3
115,325	+		Psest_0118	0.55	+0.1
115,325	+		Psest_0118	0.55	+0.9
115,325	+		Psest_0118	0.55	-1.5
115,325	+		Psest_0118	0.55	+1.3
115,326	-		Psest_0118	0.55	-1.5
115,326	-		Psest_0118	0.55	+1.3
115,326	-		Psest_0118	0.55	-0.3
115,326	-		Psest_0118	0.55	+1.3
115,326	-		Psest_0118	0.55	-0.5
115,326	-		Psest_0118	0.55	-0.7
115,326	-		Psest_0118	0.55	+1.3
115,326	-		Psest_0118	0.55	+2.9
115,473	+		Psest_0118	0.87	+0.9
115,474	-		Psest_0118	0.87	+0.9
115,474	-		Psest_0118	0.87	-0.7
115,474	-		Psest_0118	0.87	-0.3
115,650	+		Psest_0119	0.45	+0.2
115,650	+		Psest_0119	0.45	-1.0
115,651	-		Psest_0119	0.46	-1.0
115,651	-		Psest_0119	0.46	-1.3
115,651	-		Psest_0119	0.46	-0.7
115,834	-				-0.9
115,907	-				+0.3
115,907	-				+0.1
115,907	-				+1.9
115,907	-				+0.7
115,907	-				+0.3
115,907	-				-1.0
115,907	-				-0.1
115,907	-				-0.7
115,933	-				-0.4
115,933	-				-0.3
115,933	-				+0.3
115,933	-				-0.3
115,933	-				-2.1
115,985	-				-0.3
115,985	-				+0.7
115,988	-				+1.6
115,991	+				-2.3
116,026	+		Psest_0120	0.14	+0.0
116,065	-		Psest_0120	0.26	-1.7
116,090	+		Psest_0120	0.33	-2.0
116,090	+		Psest_0120	0.33	+0.2
116,091	-		Psest_0120	0.33	-1.1
116,091	-		Psest_0120	0.33	+1.3
116,164	+		Psest_0120	0.54	-0.5
116,166	+		Psest_0120	0.55	-0.7
116,166	+		Psest_0120	0.55	+1.7
116,203	-		Psest_0120	0.66	+0.3
116,238	+		Psest_0120	0.76	+1.0
116,239	-		Psest_0120	0.76	-0.3
116,239	-		Psest_0120	0.76	-0.3
116,239	-		Psest_0120	0.76	+2.3
116,288	+				-1.6
116,288	+				+0.2
116,288	+				-0.0
116,288	+				+0.1
116,289	-				-1.9
116,320	+				-0.6
116,321	-				-0.4
116,339	-				+0.3
116,342	+				+0.7
116,342	+				-0.4
116,342	+				-1.1
116,342	+				-1.6
116,342	+				+0.8
116,343	-				-0.6
116,389	+				+0.9
116,567	+		Psest_0121	0.20	+1.0
116,567	+		Psest_0121	0.20	-0.3
116,567	+		Psest_0121	0.20	+0.2
116,568	-		Psest_0121	0.20	-0.5
116,568	-		Psest_0121	0.20	+0.1
116,656	+		Psest_0121	0.27	+2.0
116,657	-		Psest_0121	0.27	-1.4
116,657	-		Psest_0121	0.27	-1.1
116,662	-		Psest_0121	0.27	+0.8