Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1144

Experiment: methylglyoxal 0.0016 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.0016 vol%
1,240,642	+				-1.2
1,240,643	-				+0.8
1,240,643	-				-1.8
1,240,697	+				-1.6
1,240,697	+				-0.4
1,240,697	+				+0.2
1,240,698	-				+0.2
1,240,722	+				-0.6
1,240,961	-		Psest_1143	0.31	-2.6
1,241,027	+		Psest_1143	0.39	-0.2
1,241,108	+		Psest_1143	0.49	-0.0
1,241,109	-		Psest_1143	0.49	-0.9
1,241,144	+		Psest_1143	0.53	-0.7
1,241,145	-		Psest_1143	0.53	+0.5
1,241,145	-		Psest_1143	0.53	+0.3
1,241,268	+		Psest_1143	0.68	-2.4
1,241,269	-		Psest_1143	0.68	-0.4
1,241,299	+		Psest_1143	0.72	-2.5
1,241,299	+		Psest_1143	0.72	-2.9
1,241,300	-		Psest_1143	0.72	-1.8
1,241,300	-		Psest_1143	0.72	-0.4
1,241,300	-		Psest_1143	0.72	-1.4
1,241,300	-		Psest_1143	0.72	-0.9
1,241,300	-		Psest_1143	0.72	+0.6
1,241,507	-				-0.6
1,241,784	+		Psest_1144	0.12	-0.4
1,242,097	-		Psest_1144	0.31	-0.3
1,242,097	-		Psest_1144	0.31	+2.6
1,242,097	-		Psest_1144	0.31	-1.8
1,242,273	+		Psest_1144	0.41	+1.2
1,242,273	+		Psest_1144	0.41	+0.2
1,242,273	+		Psest_1144	0.41	-0.4
1,242,273	+		Psest_1144	0.41	+1.2
1,242,306	+		Psest_1144	0.43	-0.2
1,242,307	-		Psest_1144	0.43	-2.4
1,242,700	-		Psest_1144	0.66	+0.6
1,242,700	-		Psest_1144	0.66	+1.6
1,242,700	-		Psest_1144	0.66	+1.2
1,242,813	+		Psest_1144	0.73	+1.2
1,242,814	-		Psest_1144	0.73	+0.4
1,242,814	-		Psest_1144	0.73	-0.3
1,242,814	-		Psest_1144	0.73	+0.2
1,243,276	+				-0.8
1,243,276	+				+1.9
1,243,277	-				+0.2
1,243,277	-				-0.3
1,243,277	-				+1.2
1,243,277	-				+0.2
1,243,277	-				+3.7
1,243,277	-				-0.1
1,243,292	-				+0.3
1,243,316	+				-0.2
1,243,499	-		Psest_1145	0.51	-0.5
1,243,568	+		Psest_1145	0.70	+0.3
1,243,602	+		Psest_1145	0.80	+1.2
1,243,602	+		Psest_1145	0.80	-2.6
1,243,611	-		Psest_1145	0.82	-0.8
1,243,611	-		Psest_1145	0.82	-1.4
1,243,748	+				+1.3
1,243,748	+				+0.7
1,243,748	+				-0.2
1,243,749	-				+1.2
1,243,749	-				+1.2
1,243,749	-				+1.6
1,243,749	-				+1.2
1,243,749	-				+0.5
1,243,766	+				-0.1
1,243,810	+				+2.1
1,243,810	+				-2.0
1,243,810	+				-1.0
1,243,810	+				+0.2
1,243,810	+				+1.9
1,243,810	+				+0.0
1,243,810	+				-1.0
1,243,810	+				-2.4
1,243,810	+				-1.0
1,243,810	+				-0.8
1,243,811	-				+0.6
1,243,811	-				+3.0
1,243,811	-				+0.7
1,243,811	-				-1.6
1,243,811	-				+0.2
1,243,811	-				+0.7
1,243,811	-				-1.5
1,243,966	+		Psest_1146	0.15	-1.8
1,243,966	+		Psest_1146	0.15	+1.4
1,243,967	-		Psest_1146	0.16	+1.8
1,244,207	+		Psest_1146	0.39	+1.4
1,244,207	+		Psest_1146	0.39	+3.3