Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1030

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,113,694	+		Psest_1028	0.29	+1.4
1,113,694	+		Psest_1028	0.29	-0.3
1,113,694	+		Psest_1028	0.29	+0.0
1,113,695	-		Psest_1028	0.29	-1.1
1,113,754	+		Psest_1028	0.36	+0.6
1,113,754	+		Psest_1028	0.36	-1.2
1,113,754	+		Psest_1028	0.36	+1.0
1,113,754	+		Psest_1028	0.36	+0.3
1,113,754	+		Psest_1028	0.36	+0.5
1,113,754	+		Psest_1028	0.36	-1.4
1,113,754	+		Psest_1028	0.36	-0.4
1,113,754	+		Psest_1028	0.36	-0.5
1,113,754	+		Psest_1028	0.36	+0.5
1,113,754	+		Psest_1028	0.36	+0.1
1,113,754	+		Psest_1028	0.36	-2.1
1,113,754	+		Psest_1028	0.36	+0.3
1,113,755	-		Psest_1028	0.36	+0.1
1,113,755	-		Psest_1028	0.36	+0.3
1,113,755	-		Psest_1028	0.36	-1.3
1,113,755	-		Psest_1028	0.36	-0.9
1,113,755	-		Psest_1028	0.36	-0.4
1,113,755	-		Psest_1028	0.36	-0.7
1,113,755	-		Psest_1028	0.36	-0.0
1,113,755	-		Psest_1028	0.36	+1.0
1,113,930	+		Psest_1028	0.58	+1.2
1,113,965	-		Psest_1028	0.63	+0.2
1,114,049	+		Psest_1028	0.73	-1.0
1,114,049	+		Psest_1028	0.73	-1.2
1,114,049	+		Psest_1028	0.73	+0.5
1,114,050	-		Psest_1028	0.73	+0.4
1,114,050	-		Psest_1028	0.73	-0.1
1,114,105	+		Psest_1028	0.80	+0.5
1,114,105	+		Psest_1028	0.80	-0.1
1,114,105	+		Psest_1028	0.80	+1.3
1,114,105	+		Psest_1028	0.80	+0.6
1,114,105	+		Psest_1028	0.80	+0.0
1,114,105	+		Psest_1028	0.80	+0.5
1,114,106	-		Psest_1028	0.80	-0.3
1,114,106	-		Psest_1028	0.80	+0.0
1,114,106	-		Psest_1028	0.80	+0.9
1,114,106	-		Psest_1028	0.80	-0.5
1,114,106	-		Psest_1028	0.80	+1.5
1,114,106	-		Psest_1028	0.80	-1.2
1,114,106	-		Psest_1028	0.80	+1.6
1,114,106	-		Psest_1028	0.80	+0.3
1,114,106	-		Psest_1028	0.80	+1.0
1,114,106	-		Psest_1028	0.80	-0.2
1,114,106	-		Psest_1028	0.80	+0.3
1,114,255	+				+1.7
1,114,256	-				+0.5
1,114,259	+				+0.5
1,114,259	+				+0.5
1,114,259	+				-0.3
1,114,259	+				-1.0
1,114,259	+				+1.0
1,114,259	+				+1.0
1,114,259	+				+0.4
1,114,259	+				-1.0
1,114,259	+				-0.1
1,114,259	+				+0.1
1,114,259	+				+0.9
1,114,259	+				+0.9
1,114,259	+				+0.5
1,114,260	-				+1.8
1,114,260	-				+0.6
1,114,260	-				-1.3
1,114,260	-				-0.4
1,114,260	-				-0.6
1,114,260	-				-0.5
1,114,260	-				+0.3
1,114,263	+				+0.2
1,114,320	+				-1.1
1,114,342	+				+1.4
1,114,342	+				-0.1
1,114,342	+				+0.8
1,114,342	+				-0.7
1,114,376	+				-0.5
1,114,376	+				+0.4
1,114,376	+				+0.6
1,114,376	+				-0.1
1,114,377	-				+0.8
1,114,377	-				+1.3
1,114,377	-				+0.7
1,114,377	-				+0.0
1,114,377	-				+0.7
1,114,377	-				+0.1
1,114,475	+		Psest_1029	0.38	+0.2
1,114,475	+		Psest_1029	0.38	-0.5
1,114,475	+		Psest_1029	0.38	+0.7
1,114,475	+		Psest_1029	0.38	+0.3
1,114,475	+		Psest_1029	0.38	+0.5
1,114,475	+		Psest_1029	0.38	+1.0
1,114,475	+		Psest_1029	0.38	+1.0
1,114,688	-				+1.6
1,114,915	+		Psest_1030	0.33	-0.3
1,114,916	-		Psest_1030	0.33	+0.0
1,114,916	-		Psest_1030	0.33	+0.4
1,114,916	-		Psest_1030	0.33	+0.6
1,114,916	-		Psest_1030	0.33	+0.5
1,114,916	-		Psest_1030	0.33	+0.4
1,114,916	-		Psest_1030	0.33	+0.0
1,114,916	-		Psest_1030	0.33	-0.6
1,114,962	-		Psest_1030	0.39	+0.4
1,114,962	-		Psest_1030	0.39	-0.2
1,115,012	+		Psest_1030	0.45	-0.1
1,115,240	+		Psest_1030	0.74	-0.3
1,115,241	-		Psest_1030	0.74	-1.8
1,115,241	-		Psest_1030	0.74	+0.9
1,115,389	+				+0.3
1,115,389	+				+0.2
1,115,390	-				+0.4
1,115,425	+				+0.8
1,115,425	+				+0.7
1,115,425	+				-0.9
1,115,425	+				+0.0
1,115,426	-				+0.4
1,115,426	-				+0.4
1,115,426	-				+1.0
1,115,426	-				-0.4
1,115,426	-				-0.1
1,115,436	+				-1.0
1,115,436	+				+0.1
1,115,436	+				+0.0
1,115,436	+				-0.2
1,115,436	+				-1.3
1,115,436	+				+0.4
1,115,437	-				-0.7
1,115,437	-				+0.8
1,115,437	-				+0.1
1,115,437	-				-0.8
1,115,437	-				-0.3
1,115,437	-				-0.9
1,115,471	+				-0.5
1,115,472	-				+0.7
1,115,473	+				+0.4
1,115,473	+				+0.2
1,115,473	+				-1.4
1,115,473	+				-0.1
1,115,473	+				+1.4
1,115,473	+				-1.7
1,115,473	+				+1.4
1,115,473	+				-0.6
1,115,473	+				+0.3
1,115,474	-				-1.2
1,115,474	-				+0.5
1,115,474	-				+0.2
1,115,538	+				-0.6
1,115,538	+				-1.1
1,115,538	+				-0.8
1,115,538	+				+0.6
1,115,538	+				-2.6
1,115,538	+				+0.3
1,115,538	+				-0.6
1,115,538	+				+0.0
1,115,538	+				-0.4
1,115,538	+				-1.1
1,115,538	+				-0.0
1,115,538	+				+0.4
1,115,539	-				+0.2
1,115,539	-				+0.7
1,115,539	-				+0.0
1,115,539	-				-0.2
1,115,539	-				+0.4
1,115,539	-				-0.2
1,115,539	-				-0.0
1,115,539	-				+0.2
1,115,579	+				-0.5
1,115,579	+				-0.2
1,115,579	+				+0.0
1,115,661	-				-3.4
1,115,810	-		Psest_1031	0.19	-0.6
1,115,878	+		Psest_1031	0.23	-0.4
1,115,905	+		Psest_1031	0.25	+0.4
1,115,905	+		Psest_1031	0.25	-1.3
1,115,905	+		Psest_1031	0.25	+0.0
1,116,088	+		Psest_1031	0.37	-1.9
1,116,088	+		Psest_1031	0.37	-2.2
1,116,089	-		Psest_1031	0.37	-1.3
1,116,089	-		Psest_1031	0.37	-1.4
1,116,089	-		Psest_1031	0.37	-0.8
1,116,109	+		Psest_1031	0.38	-1.6
1,116,109	+		Psest_1031	0.38	-1.3
1,116,109	+		Psest_1031	0.38	+0.4
1,116,109	+		Psest_1031	0.38	+1.6
1,116,110	-		Psest_1031	0.38	-1.9
1,116,110	-		Psest_1031	0.38	-2.5
1,116,110	-		Psest_1031	0.38	-1.8
1,116,163	+		Psest_1031	0.42	-1.3
1,116,163	+		Psest_1031	0.42	-2.4
1,116,164	-		Psest_1031	0.42	-0.6
1,116,214	+		Psest_1031	0.45	-1.7
1,116,214	+		Psest_1031	0.45	-3.0
1,116,214	+		Psest_1031	0.45	-2.0
1,116,214	+		Psest_1031	0.45	-2.0
1,116,214	+		Psest_1031	0.45	-2.1
1,116,214	+		Psest_1031	0.45	-2.1
1,116,242	-		Psest_1031	0.47	-2.3