Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_262p02180 and PGA1_262p02190 are separated by 9 nucleotides PGA1_262p02190 and PGA1_262p02200 overlap by 7 nucleotides PGA1_262p02200 and PGA1_262p02210 are separated by 204 nucleotides
PGA1_262p02180: PGA1_262p02180 - molybdate-binding periplasmic protein ModA, at 235,681 to 236,496
_262p02180
PGA1_262p02190: PGA1_262p02190 - molybdenum transport system permease protein ModB, at 236,506 to 237,204
_262p02190
PGA1_262p02200: PGA1_262p02200 - molybdenum import ATP-binding protein ModC, at 237,198 to 238,289
_262p02200
PGA1_262p02210: PGA1_262p02210 - FAD dependent oxidoreductase, at 238,494 to 239,795
_262p02210
Position (kb) 237
238
239 Strain fitness (log2 ratio) -1
0
1
2 at 236.306 kb on + strand, within PGA1_262p02180 at 236.314 kb on - strand, within PGA1_262p02180 at 236.324 kb on + strand, within PGA1_262p02180 at 236.465 kb on - strand at 236.481 kb on - strand at 236.487 kb on + strand at 236.723 kb on + strand, within PGA1_262p02190 at 236.731 kb on - strand, within PGA1_262p02190 at 237.170 kb on + strand at 237.383 kb on + strand, within PGA1_262p02200 at 237.460 kb on - strand, within PGA1_262p02200 at 237.556 kb on + strand, within PGA1_262p02200 at 237.586 kb on - strand, within PGA1_262p02200 at 237.590 kb on + strand, within PGA1_262p02200 at 237.635 kb on + strand, within PGA1_262p02200 at 237.643 kb on - strand, within PGA1_262p02200 at 237.913 kb on + strand, within PGA1_262p02200 at 237.921 kb on - strand, within PGA1_262p02200 at 238.206 kb on - strand at 238.388 kb on + strand at 238.404 kb on + strand at 238.412 kb on - strand at 238.481 kb on + strand at 238.675 kb on + strand, within PGA1_262p02210 at 238.722 kb on + strand, within PGA1_262p02210 at 238.766 kb on + strand, within PGA1_262p02210 at 239.150 kb on + strand, within PGA1_262p02210 at 239.168 kb on - strand, within PGA1_262p02210
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 236,306 + PGA1_262p02180 0.77 +0.1 236,314 - PGA1_262p02180 0.78 -0.3 236,324 + PGA1_262p02180 0.79 +0.6 236,465 - +0.6 236,481 - +2.2 236,487 + -0.0 236,723 + PGA1_262p02190 0.31 -0.4 236,731 - PGA1_262p02190 0.32 -0.2 237,170 + +0.2 237,383 + PGA1_262p02200 0.17 +1.0 237,460 - PGA1_262p02200 0.24 +0.5 237,556 + PGA1_262p02200 0.33 +0.4 237,586 - PGA1_262p02200 0.36 +0.8 237,590 + PGA1_262p02200 0.36 +1.0 237,635 + PGA1_262p02200 0.40 +0.2 237,643 - PGA1_262p02200 0.41 +0.4 237,913 + PGA1_262p02200 0.65 +0.4 237,921 - PGA1_262p02200 0.66 -0.3 238,206 - -0.0 238,388 + -0.5 238,404 + -1.3 238,412 - -0.3 238,481 + -0.1 238,675 + PGA1_262p02210 0.14 +0.4 238,722 + PGA1_262p02210 0.18 -0.6 238,766 + PGA1_262p02210 0.21 -0.2 239,150 + PGA1_262p02210 0.50 +0.7 239,168 - PGA1_262p02210 0.52 -0.1
Or see this region's nucleotide sequence