Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2158 and Psest_2159 are separated by 281 nucleotides Psest_2159 and Psest_2160 overlap by 4 nucleotides
Psest_2158: Psest_2158 - alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase, at 2,308,884 to 2,311,097
_2158
Psest_2159: Psest_2159 - Predicted integral membrane protein, at 2,311,379 to 2,312,377
_2159
Psest_2160: Psest_2160 - Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes, at 2,312,374 to 2,313,615
_2160
Position (kb)
2311
2312
2313 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2310.394 kb on - strand, within Psest_2158 at 2310.394 kb on - strand, within Psest_2158 at 2310.394 kb on - strand, within Psest_2158 at 2310.394 kb on - strand, within Psest_2158 at 2310.423 kb on + strand, within Psest_2158 at 2310.423 kb on + strand, within Psest_2158 at 2310.423 kb on + strand, within Psest_2158 at 2310.423 kb on + strand, within Psest_2158 at 2310.424 kb on - strand, within Psest_2158 at 2310.424 kb on - strand, within Psest_2158 at 2310.456 kb on + strand, within Psest_2158 at 2310.456 kb on + strand, within Psest_2158 at 2310.456 kb on + strand, within Psest_2158 at 2310.456 kb on + strand, within Psest_2158 at 2310.456 kb on + strand, within Psest_2158 at 2310.456 kb on + strand, within Psest_2158 at 2310.456 kb on + strand, within Psest_2158 at 2310.456 kb on + strand, within Psest_2158 at 2310.456 kb on + strand, within Psest_2158 at 2310.456 kb on + strand, within Psest_2158 at 2310.456 kb on + strand, within Psest_2158 at 2310.457 kb on - strand, within Psest_2158 at 2310.457 kb on - strand, within Psest_2158 at 2310.457 kb on - strand, within Psest_2158 at 2310.457 kb on - strand, within Psest_2158 at 2310.457 kb on - strand, within Psest_2158 at 2310.457 kb on - strand, within Psest_2158 at 2310.457 kb on - strand, within Psest_2158 at 2310.457 kb on - strand, within Psest_2158 at 2310.457 kb on - strand, within Psest_2158 at 2310.576 kb on + strand, within Psest_2158 at 2310.576 kb on + strand, within Psest_2158 at 2310.742 kb on - strand, within Psest_2158 at 2310.821 kb on + strand, within Psest_2158 at 2310.821 kb on + strand, within Psest_2158 at 2310.822 kb on - strand, within Psest_2158 at 2311.096 kb on - strand at 2311.152 kb on + strand at 2311.283 kb on - strand at 2311.283 kb on - strand at 2311.455 kb on + strand at 2311.491 kb on + strand, within Psest_2159 at 2311.492 kb on - strand, within Psest_2159 at 2311.492 kb on - strand, within Psest_2159 at 2311.492 kb on - strand, within Psest_2159 at 2311.492 kb on - strand, within Psest_2159 at 2311.492 kb on - strand, within Psest_2159 at 2311.677 kb on + strand, within Psest_2159 at 2311.677 kb on + strand, within Psest_2159 at 2311.677 kb on + strand, within Psest_2159 at 2311.677 kb on + strand, within Psest_2159 at 2311.677 kb on + strand, within Psest_2159 at 2311.677 kb on + strand, within Psest_2159 at 2311.677 kb on + strand, within Psest_2159 at 2311.677 kb on + strand, within Psest_2159 at 2311.677 kb on + strand, within Psest_2159 at 2311.677 kb on + strand, within Psest_2159 at 2311.677 kb on + strand, within Psest_2159 at 2311.678 kb on - strand, within Psest_2159 at 2311.678 kb on - strand, within Psest_2159 at 2311.678 kb on - strand, within Psest_2159 at 2311.678 kb on - strand, within Psest_2159 at 2311.678 kb on - strand, within Psest_2159 at 2311.678 kb on - strand, within Psest_2159 at 2311.678 kb on - strand, within Psest_2159 at 2311.678 kb on - strand, within Psest_2159 at 2311.678 kb on - strand, within Psest_2159 at 2311.678 kb on - strand, within Psest_2159 at 2311.678 kb on - strand, within Psest_2159 at 2311.678 kb on - strand, within Psest_2159 at 2311.678 kb on - strand, within Psest_2159 at 2311.678 kb on - strand, within Psest_2159 at 2311.678 kb on - strand, within Psest_2159 at 2311.680 kb on + strand, within Psest_2159 at 2311.680 kb on + strand, within Psest_2159 at 2311.680 kb on + strand, within Psest_2159 at 2311.681 kb on - strand, within Psest_2159 at 2311.681 kb on - strand, within Psest_2159 at 2311.818 kb on + strand, within Psest_2159 at 2311.819 kb on - strand, within Psest_2159 at 2311.867 kb on + strand, within Psest_2159 at 2311.867 kb on + strand, within Psest_2159 at 2311.938 kb on + strand, within Psest_2159 at 2311.939 kb on - strand, within Psest_2159 at 2312.073 kb on + strand, within Psest_2159 at 2312.074 kb on - strand, within Psest_2159 at 2312.074 kb on - strand, within Psest_2159 at 2312.157 kb on + strand, within Psest_2159 at 2312.158 kb on - strand, within Psest_2159 at 2312.166 kb on + strand, within Psest_2159 at 2312.166 kb on + strand, within Psest_2159 at 2312.166 kb on + strand, within Psest_2159 at 2312.166 kb on + strand, within Psest_2159 at 2312.167 kb on - strand, within Psest_2159 at 2312.167 kb on - strand, within Psest_2159 at 2312.167 kb on - strand, within Psest_2159 at 2312.167 kb on - strand, within Psest_2159 at 2312.214 kb on + strand, within Psest_2159 at 2312.214 kb on + strand, within Psest_2159 at 2312.214 kb on + strand, within Psest_2159 at 2312.215 kb on - strand, within Psest_2159 at 2312.215 kb on - strand, within Psest_2159 at 2312.215 kb on - strand, within Psest_2159 at 2312.232 kb on + strand, within Psest_2159 at 2312.232 kb on + strand, within Psest_2159 at 2312.233 kb on - strand, within Psest_2159 at 2312.233 kb on - strand, within Psest_2159 at 2312.302 kb on - strand at 2312.302 kb on - strand at 2312.369 kb on - strand at 2312.753 kb on + strand, within Psest_2160 at 2312.753 kb on + strand, within Psest_2160 at 2312.786 kb on + strand, within Psest_2160 at 2312.786 kb on + strand, within Psest_2160 at 2312.787 kb on - strand, within Psest_2160 at 2312.787 kb on - strand, within Psest_2160 at 2312.792 kb on + strand, within Psest_2160 at 2312.792 kb on + strand, within Psest_2160 at 2312.792 kb on + strand, within Psest_2160 at 2312.792 kb on + strand, within Psest_2160 at 2312.793 kb on - strand, within Psest_2160 at 2312.793 kb on - strand, within Psest_2160 at 2312.793 kb on - strand, within Psest_2160 at 2312.793 kb on - strand, within Psest_2160 at 2312.969 kb on + strand, within Psest_2160 at 2313.176 kb on + strand, within Psest_2160
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,310,394 - Psest_2158 0.68 -0.1 2,310,394 - Psest_2158 0.68 +0.4 2,310,394 - Psest_2158 0.68 +0.3 2,310,394 - Psest_2158 0.68 -0.5 2,310,423 + Psest_2158 0.70 +2.5 2,310,423 + Psest_2158 0.70 +0.1 2,310,423 + Psest_2158 0.70 +0.7 2,310,423 + Psest_2158 0.70 +0.7 2,310,424 - Psest_2158 0.70 -1.1 2,310,424 - Psest_2158 0.70 +0.5 2,310,456 + Psest_2158 0.71 +1.3 2,310,456 + Psest_2158 0.71 +0.2 2,310,456 + Psest_2158 0.71 +0.9 2,310,456 + Psest_2158 0.71 +1.3 2,310,456 + Psest_2158 0.71 +0.4 2,310,456 + Psest_2158 0.71 +1.8 2,310,456 + Psest_2158 0.71 +0.7 2,310,456 + Psest_2158 0.71 -1.5 2,310,456 + Psest_2158 0.71 +0.2 2,310,456 + Psest_2158 0.71 +0.3 2,310,456 + Psest_2158 0.71 +0.9 2,310,457 - Psest_2158 0.71 -0.0 2,310,457 - Psest_2158 0.71 +0.5 2,310,457 - Psest_2158 0.71 +1.1 2,310,457 - Psest_2158 0.71 +0.9 2,310,457 - Psest_2158 0.71 +0.1 2,310,457 - Psest_2158 0.71 +0.3 2,310,457 - Psest_2158 0.71 +0.5 2,310,457 - Psest_2158 0.71 +0.4 2,310,457 - Psest_2158 0.71 +1.7 2,310,576 + Psest_2158 0.76 +1.5 2,310,576 + Psest_2158 0.76 +0.3 2,310,742 - Psest_2158 0.84 +0.2 2,310,821 + Psest_2158 0.87 +0.5 2,310,821 + Psest_2158 0.87 +1.4 2,310,822 - Psest_2158 0.88 +0.4 2,311,096 - +0.2 2,311,152 + +0.7 2,311,283 - +1.2 2,311,283 - +0.7 2,311,455 + -0.1 2,311,491 + Psest_2159 0.11 -0.1 2,311,492 - Psest_2159 0.11 +0.3 2,311,492 - Psest_2159 0.11 +0.3 2,311,492 - Psest_2159 0.11 +1.0 2,311,492 - Psest_2159 0.11 +0.5 2,311,492 - Psest_2159 0.11 +0.9 2,311,677 + Psest_2159 0.30 -0.0 2,311,677 + Psest_2159 0.30 -0.4 2,311,677 + Psest_2159 0.30 -0.2 2,311,677 + Psest_2159 0.30 +1.2 2,311,677 + Psest_2159 0.30 -0.1 2,311,677 + Psest_2159 0.30 -0.1 2,311,677 + Psest_2159 0.30 -0.5 2,311,677 + Psest_2159 0.30 +1.3 2,311,677 + Psest_2159 0.30 +0.3 2,311,677 + Psest_2159 0.30 -0.7 2,311,677 + Psest_2159 0.30 +0.3 2,311,678 - Psest_2159 0.30 +0.3 2,311,678 - Psest_2159 0.30 +0.2 2,311,678 - Psest_2159 0.30 +0.5 2,311,678 - Psest_2159 0.30 +1.5 2,311,678 - Psest_2159 0.30 -0.1 2,311,678 - Psest_2159 0.30 +0.1 2,311,678 - Psest_2159 0.30 -0.2 2,311,678 - Psest_2159 0.30 +0.2 2,311,678 - Psest_2159 0.30 -0.4 2,311,678 - Psest_2159 0.30 +1.3 2,311,678 - Psest_2159 0.30 -1.1 2,311,678 - Psest_2159 0.30 -2.3 2,311,678 - Psest_2159 0.30 +0.1 2,311,678 - Psest_2159 0.30 +0.9 2,311,678 - Psest_2159 0.30 +0.6 2,311,680 + Psest_2159 0.30 -0.6 2,311,680 + Psest_2159 0.30 -2.0 2,311,680 + Psest_2159 0.30 +1.5 2,311,681 - Psest_2159 0.30 +0.6 2,311,681 - Psest_2159 0.30 +1.1 2,311,818 + Psest_2159 0.44 +0.8 2,311,819 - Psest_2159 0.44 +0.0 2,311,867 + Psest_2159 0.49 +1.1 2,311,867 + Psest_2159 0.49 +0.6 2,311,938 + Psest_2159 0.56 +0.3 2,311,939 - Psest_2159 0.56 -0.7 2,312,073 + Psest_2159 0.69 +0.9 2,312,074 - Psest_2159 0.70 -0.2 2,312,074 - Psest_2159 0.70 +1.2 2,312,157 + Psest_2159 0.78 +0.3 2,312,158 - Psest_2159 0.78 +0.7 2,312,166 + Psest_2159 0.79 -0.4 2,312,166 + Psest_2159 0.79 -0.0 2,312,166 + Psest_2159 0.79 +0.7 2,312,166 + Psest_2159 0.79 +1.9 2,312,167 - Psest_2159 0.79 +1.1 2,312,167 - Psest_2159 0.79 +1.1 2,312,167 - Psest_2159 0.79 -0.4 2,312,167 - Psest_2159 0.79 +0.5 2,312,214 + Psest_2159 0.84 +0.1 2,312,214 + Psest_2159 0.84 -0.1 2,312,214 + Psest_2159 0.84 +1.9 2,312,215 - Psest_2159 0.84 +1.3 2,312,215 - Psest_2159 0.84 +1.2 2,312,215 - Psest_2159 0.84 +0.0 2,312,232 + Psest_2159 0.85 +0.0 2,312,232 + Psest_2159 0.85 -0.7 2,312,233 - Psest_2159 0.85 +1.4 2,312,233 - Psest_2159 0.85 +0.9 2,312,302 - -0.4 2,312,302 - +0.2 2,312,369 - +0.9 2,312,753 + Psest_2160 0.31 +0.4 2,312,753 + Psest_2160 0.31 +0.7 2,312,786 + Psest_2160 0.33 -0.1 2,312,786 + Psest_2160 0.33 +0.1 2,312,787 - Psest_2160 0.33 -0.4 2,312,787 - Psest_2160 0.33 +0.5 2,312,792 + Psest_2160 0.34 -0.6 2,312,792 + Psest_2160 0.34 -0.4 2,312,792 + Psest_2160 0.34 -0.1 2,312,792 + Psest_2160 0.34 +1.0 2,312,793 - Psest_2160 0.34 +0.6 2,312,793 - Psest_2160 0.34 +0.1 2,312,793 - Psest_2160 0.34 -0.5 2,312,793 - Psest_2160 0.34 -1.1 2,312,969 + Psest_2160 0.48 +0.3 2,313,176 + Psest_2160 0.65 +0.1
Or see this region's nucleotide sequence