Strain Fitness in Shewanella amazonensis SB2B around Sama_3392

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
4,019,585	+		Sama_3391	0.19	+0.5
4,019,585	+		Sama_3391	0.19	+1.7
4,019,585	+		Sama_3391	0.19	-0.7
4,019,586	-		Sama_3391	0.19	+1.0
4,019,699	-		Sama_3391	0.29	-1.1
4,019,716	-		Sama_3391	0.30	+0.6
4,019,731	+		Sama_3391	0.31	+0.8
4,019,732	-		Sama_3391	0.31	-0.8
4,019,737	+		Sama_3391	0.32	+0.0
4,019,737	+		Sama_3391	0.32	+0.7
4,019,737	+		Sama_3391	0.32	+0.8
4,019,738	-		Sama_3391	0.32	-1.6
4,019,738	-		Sama_3391	0.32	+0.7
4,019,774	+		Sama_3391	0.35	+0.3
4,019,775	-		Sama_3391	0.35	-0.4
4,019,775	-		Sama_3391	0.35	-2.1
4,019,775	-		Sama_3391	0.35	-0.3
4,019,782	+		Sama_3391	0.36	+0.9
4,019,783	-		Sama_3391	0.36	+1.4
4,019,806	+		Sama_3391	0.38	-0.2
4,019,806	+		Sama_3391	0.38	-1.6
4,019,806	+		Sama_3391	0.38	-0.6
4,019,806	+		Sama_3391	0.38	-0.0
4,019,806	+		Sama_3391	0.38	+0.7
4,019,806	+		Sama_3391	0.38	-1.0
4,019,806	+		Sama_3391	0.38	-1.2
4,019,806	+		Sama_3391	0.38	-0.9
4,019,806	+		Sama_3391	0.38	-0.4
4,019,807	-		Sama_3391	0.38	-0.0
4,019,807	-		Sama_3391	0.38	+0.4
4,019,807	-		Sama_3391	0.38	-0.4
4,019,807	-		Sama_3391	0.38	-0.3
4,019,807	-		Sama_3391	0.38	+0.8
4,019,843	+		Sama_3391	0.41	-0.7
4,019,843	+		Sama_3391	0.41	+1.0
4,019,844	-		Sama_3391	0.41	-1.5
4,019,844	-		Sama_3391	0.41	-0.3
4,019,844	-		Sama_3391	0.41	+0.8
4,019,915	+		Sama_3391	0.47	-1.4
4,019,915	+		Sama_3391	0.47	+0.3
4,019,915	+		Sama_3391	0.47	-0.2
4,019,915	+		Sama_3391	0.47	-0.3
4,019,915	+		Sama_3391	0.47	-1.7
4,019,915	+		Sama_3391	0.47	+0.6
4,019,916	-		Sama_3391	0.47	-0.1
4,019,916	-		Sama_3391	0.47	-0.2
4,019,916	-		Sama_3391	0.47	-0.7
4,019,916	-		Sama_3391	0.47	-0.8
4,019,916	-		Sama_3391	0.47	-0.8
4,019,916	-		Sama_3391	0.47	-0.5
4,019,916	-		Sama_3391	0.47	-0.8
4,019,916	-		Sama_3391	0.47	-0.6
4,019,926	-		Sama_3391	0.48	-0.8
4,019,926	-		Sama_3391	0.48	+0.4
4,020,030	+		Sama_3391	0.56	+1.0
4,020,096	+		Sama_3391	0.62	-1.0
4,020,096	+		Sama_3391	0.62	-1.6
4,020,096	+		Sama_3391	0.62	-0.1
4,020,096	+		Sama_3391	0.62	-0.0
4,020,096	+		Sama_3391	0.62	-0.5
4,020,097	-		Sama_3391	0.62	+1.2
4,020,097	-		Sama_3391	0.62	-0.3
4,020,097	-		Sama_3391	0.62	-1.2
4,020,097	-		Sama_3391	0.62	-0.0
4,020,097	-		Sama_3391	0.62	+2.5
4,020,167	+		Sama_3391	0.67	-1.9
4,020,187	+		Sama_3391	0.69	+1.0
4,020,187	+		Sama_3391	0.69	-0.8
4,020,187	+		Sama_3391	0.69	-1.3
4,020,187	+		Sama_3391	0.69	-1.8
4,020,188	-		Sama_3391	0.69	-0.4
4,020,188	-		Sama_3391	0.69	-0.6
4,020,193	-		Sama_3391	0.70	-0.1
4,020,254	+		Sama_3391	0.75	-0.1
4,020,254	+		Sama_3391	0.75	-1.2
4,020,328	-		Sama_3391	0.81	+0.4
4,020,347	+		Sama_3391	0.82	-0.2
4,020,348	-		Sama_3391	0.83	-0.1
4,020,348	-		Sama_3391	0.83	+0.7
4,020,348	-		Sama_3391	0.83	-0.1
4,020,348	-		Sama_3391	0.83	+0.3
4,020,425	+		Sama_3391	0.89	-1.4
4,020,426	-		Sama_3391	0.89	-1.0
4,020,426	-		Sama_3391	0.89	-1.6
4,020,426	-		Sama_3391	0.89	+0.8
4,020,517	-				+1.4
4,020,685	+		Sama_3392	0.27	-0.6
4,020,686	-		Sama_3392	0.27	+0.9
4,020,704	+		Sama_3392	0.30	-1.7
4,020,737	+		Sama_3392	0.37	-0.1
4,020,737	+		Sama_3392	0.37	-1.0
4,020,737	+		Sama_3392	0.37	-0.2
4,020,737	+		Sama_3392	0.37	+1.0
4,020,737	+		Sama_3392	0.37	-2.1
4,020,738	-		Sama_3392	0.37	-1.9
4,020,738	-		Sama_3392	0.37	-0.6
4,020,738	-		Sama_3392	0.37	-1.8
4,020,738	-		Sama_3392	0.37	-1.1
4,020,752	+		Sama_3392	0.40	-0.2
4,020,752	+		Sama_3392	0.40	+0.8
4,020,752	+		Sama_3392	0.40	-1.3
4,020,752	+		Sama_3392	0.40	-0.8
4,020,752	+		Sama_3392	0.40	-1.7
4,020,752	+		Sama_3392	0.40	-0.1
4,020,752	+		Sama_3392	0.40	-1.8
4,020,752	+		Sama_3392	0.40	-0.5
4,020,752	+		Sama_3392	0.40	+1.4
4,020,753	-		Sama_3392	0.40	+0.8
4,020,753	-		Sama_3392	0.40	+0.4
4,020,753	-		Sama_3392	0.40	-0.7
4,020,753	-		Sama_3392	0.40	-1.4
4,020,753	-		Sama_3392	0.40	-0.7
4,020,753	-		Sama_3392	0.40	-0.6
4,020,753	-		Sama_3392	0.40	-1.0
4,020,884	+		Sama_3392	0.66	+0.1
4,020,884	+		Sama_3392	0.66	-0.7
4,020,885	-		Sama_3392	0.66	-1.7
4,020,908	+		Sama_3392	0.71	-1.0
4,020,909	-		Sama_3392	0.71	+0.4
4,021,016	+				-0.4
4,021,016	+				-0.3
4,021,016	+				+0.4
4,021,016	+				+0.1
4,021,016	+				-0.9
4,021,017	-				+0.7
4,021,017	-				-0.6
4,021,017	-				-0.6
4,021,017	-				-1.4
4,021,017	-				-0.3
4,021,017	-				+1.5
4,021,018	+				-0.5
4,021,018	+				+0.3
4,021,019	-				+0.2
4,021,019	-				-0.3
4,021,019	-				-0.4
4,021,042	+				-0.2
4,021,042	+				-0.3
4,021,043	-				-0.3
4,021,043	-				-0.3
4,021,043	-				-0.0
4,021,048	+				+0.7
4,021,048	+				-0.8
4,021,048	+				-0.5
4,021,048	+				-0.6
4,021,049	-				-1.3
4,021,052	+				+0.4
4,021,052	+				-1.3
4,021,053	-				-0.7
4,021,053	-				-0.0
4,021,053	-				-0.8
4,021,053	-				-0.6
4,021,053	-				-1.1
4,021,065	+				+0.5
4,021,065	+				-0.2
4,021,065	+				-0.6
4,021,065	+				+0.6
4,021,065	+				-1.5
4,021,065	+				-0.1
4,021,065	+				+1.3
4,021,066	-				-0.9
4,021,066	-				+0.7
4,021,068	+				-0.6
4,021,068	+				-0.1
4,021,068	+				-0.5
4,021,068	+				-1.6
4,021,069	-				-0.7
4,021,069	-				-0.5
4,021,075	+				+0.3
4,021,148	+	fabG	Sama_3393	0.11	-1.0
4,021,148	+	fabG	Sama_3393	0.11	-0.6
4,021,149	-	fabG	Sama_3393	0.11	-0.3
4,021,149	-	fabG	Sama_3393	0.11	+0.3
4,021,166	+	fabG	Sama_3393	0.13	-0.8
4,021,167	-	fabG	Sama_3393	0.13	-2.0
4,021,167	-	fabG	Sama_3393	0.13	+0.1
4,021,310	+	fabG	Sama_3393	0.33	+0.8
4,021,310	+	fabG	Sama_3393	0.33	-0.8
4,021,311	-	fabG	Sama_3393	0.33	-1.6
4,021,313	+	fabG	Sama_3393	0.33	+0.5
4,021,314	-	fabG	Sama_3393	0.34	-0.6
4,021,389	+	fabG	Sama_3393	0.44	-3.2
4,021,389	+	fabG	Sama_3393	0.44	-0.2
4,021,389	+	fabG	Sama_3393	0.44	+1.0
4,021,389	+	fabG	Sama_3393	0.44	-0.5
4,021,389	+	fabG	Sama_3393	0.44	-1.4
4,021,390	-	fabG	Sama_3393	0.44	-0.6
4,021,415	+	fabG	Sama_3393	0.48	-0.2
4,021,415	+	fabG	Sama_3393	0.48	-0.9
4,021,416	-	fabG	Sama_3393	0.48	+2.0
4,021,416	-	fabG	Sama_3393	0.48	-0.1
4,021,416	-	fabG	Sama_3393	0.48	-0.2
4,021,521	+	fabG	Sama_3393	0.62	-1.5
4,021,526	+	fabG	Sama_3393	0.63	+0.6
4,021,526	+	fabG	Sama_3393	0.63	-0.7
4,021,526	+	fabG	Sama_3393	0.63	+1.0
4,021,526	+	fabG	Sama_3393	0.63	-1.2
4,021,526	+	fabG	Sama_3393	0.63	-0.7
4,021,527	-	fabG	Sama_3393	0.63	-2.0
4,021,527	-	fabG	Sama_3393	0.63	-2.5
4,021,527	-	fabG	Sama_3393	0.63	+1.4
4,021,527	-	fabG	Sama_3393	0.63	-1.4
4,021,550	-	fabG	Sama_3393	0.66	-0.3
4,021,603	+	fabG	Sama_3393	0.73	+0.3
4,021,604	-	fabG	Sama_3393	0.74	+0.3
4,021,751	+				-0.9
4,021,751	+				+0.4
4,021,751	+				-0.0
4,021,751	+				+1.0
4,021,751	+				-0.5
4,021,751	+				-0.9
4,021,751	+				-1.3
4,021,751	+				-1.3
4,021,751	+				-0.1
4,021,752	-				+0.3
4,021,752	-				-0.5
4,021,752	-				+2.0
4,021,757	-				+0.6
4,021,873	-				-1.2
4,021,873	-				-0.2
4,021,895	+				-1.3
4,021,895	+				-0.6
4,021,896	-				-1.1
4,021,967	+		Sama_3394	0.14	+1.4
4,021,967	+		Sama_3394	0.14	-1.6
4,022,012	+		Sama_3394	0.18	-0.0
4,022,012	+		Sama_3394	0.18	-1.3
4,022,013	-		Sama_3394	0.18	-1.0
4,022,013	-		Sama_3394	0.18	-0.7
4,022,013	-		Sama_3394	0.18	-0.0