Strain Fitness in Shewanella amazonensis SB2B around Sama_3280

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
3,895,728	+		Sama_3279	0.54	+0.4
3,895,728	+		Sama_3279	0.54	+0.5
3,895,729	-		Sama_3279	0.54	+0.0
3,895,729	-		Sama_3279	0.54	+1.3
3,895,729	-		Sama_3279	0.54	-1.2
3,895,729	-		Sama_3279	0.54	+0.0
3,895,733	+		Sama_3279	0.55	+0.7
3,895,733	+		Sama_3279	0.55	+0.3
3,895,734	-		Sama_3279	0.55	-0.7
3,895,734	-		Sama_3279	0.55	+0.0
3,895,834	+		Sama_3279	0.60	-0.3
3,895,834	+		Sama_3279	0.60	+0.8
3,895,835	-		Sama_3279	0.60	+0.8
3,895,835	-		Sama_3279	0.60	-0.3
3,895,835	-		Sama_3279	0.60	-0.2
3,895,835	-		Sama_3279	0.60	+0.8
3,895,835	-		Sama_3279	0.60	-1.9
3,895,835	-		Sama_3279	0.60	-2.1
3,895,835	-		Sama_3279	0.60	-2.8
3,895,835	-		Sama_3279	0.60	+1.4
3,895,837	+		Sama_3279	0.60	+2.0
3,895,837	+		Sama_3279	0.60	-0.2
3,895,837	+		Sama_3279	0.60	+0.8
3,895,838	-		Sama_3279	0.60	-0.8
3,896,049	-		Sama_3279	0.72	-1.1
3,896,049	-		Sama_3279	0.72	-0.7
3,896,093	+		Sama_3279	0.74	+0.4
3,896,093	+		Sama_3279	0.74	-0.2
3,896,093	+		Sama_3279	0.74	-0.1
3,896,094	-		Sama_3279	0.74	+0.8
3,896,094	-		Sama_3279	0.74	-1.1
3,896,165	+		Sama_3279	0.78	-0.8
3,896,166	-		Sama_3279	0.78	-0.2
3,896,166	-		Sama_3279	0.78	-0.4
3,896,166	-		Sama_3279	0.78	-0.4
3,896,250	+		Sama_3279	0.83	+0.7
3,896,250	+		Sama_3279	0.83	-1.0
3,896,250	+		Sama_3279	0.83	-1.6
3,896,250	+		Sama_3279	0.83	-0.6
3,896,251	-		Sama_3279	0.83	-0.6
3,896,251	-		Sama_3279	0.83	-1.3
3,896,251	-		Sama_3279	0.83	-1.6
3,896,257	+		Sama_3279	0.83	-0.3
3,896,257	+		Sama_3279	0.83	-1.0
3,896,257	+		Sama_3279	0.83	-0.6
3,896,258	-		Sama_3279	0.83	+0.7
3,896,258	-		Sama_3279	0.83	-0.3
3,896,258	-		Sama_3279	0.83	-2.0
3,896,258	-		Sama_3279	0.83	-1.0
3,896,258	-		Sama_3279	0.83	-0.8
3,896,258	-		Sama_3279	0.83	-0.9
3,896,292	+		Sama_3279	0.85	-0.2
3,896,292	+		Sama_3279	0.85	-1.2
3,896,293	-		Sama_3279	0.85	-0.6
3,896,299	+		Sama_3279	0.85	+0.0
3,896,299	+		Sama_3279	0.85	+0.4
3,896,299	+		Sama_3279	0.85	-0.3
3,896,299	+		Sama_3279	0.85	+0.6
3,896,300	-		Sama_3279	0.85	+0.0
3,896,300	-		Sama_3279	0.85	-1.0
3,896,300	-		Sama_3279	0.85	-0.2
3,896,415	+				-1.6
3,896,416	-				+0.3
3,896,416	-				-0.9
3,896,416	-				+0.7
3,896,416	-				-1.2
3,896,444	+				-0.3
3,896,445	-				-0.2
3,896,531	+				-0.8
3,896,563	-				-2.0
3,896,563	-				-0.2
3,896,567	+				+1.2
3,896,567	+				+0.2
3,896,567	+				-0.4
3,896,568	-				+0.4
3,896,616	+				+0.4
3,896,616	+				-1.1
3,896,616	+				-1.5
3,896,617	-				-0.4
3,896,617	-				+0.6
3,896,620	+				+0.0
3,896,620	+				+0.0
3,896,620	+				-1.6
3,896,620	+				-0.3
3,896,620	+				-0.3
3,896,621	-				+1.0
3,896,621	-				+3.0
3,896,621	-				+0.7
3,896,621	-				-1.0
3,896,621	-				-0.3
3,896,621	-				-1.0
3,896,621	-				-0.8
3,896,621	-				+1.2
3,896,621	-				-0.3
3,896,625	+				+0.0
3,896,625	+				+1.4
3,896,625	+				-1.0
3,896,625	+				-0.2
3,896,625	+				-0.4
3,896,625	+				-0.8
3,896,626	-				+0.6
3,896,626	-				-0.5
3,896,626	-				-0.1
3,896,626	-				-0.3
3,896,626	-				+0.1
3,896,626	-				-1.3
3,896,655	+				+0.3
3,896,728	+	ilvM	Sama_3280	0.26	+0.7
3,896,728	+	ilvM	Sama_3280	0.26	+0.4
3,896,728	+	ilvM	Sama_3280	0.26	-0.8
3,896,728	+	ilvM	Sama_3280	0.26	+1.3
3,896,728	+	ilvM	Sama_3280	0.26	-0.7
3,896,728	+	ilvM	Sama_3280	0.26	+1.2
3,896,729	-	ilvM	Sama_3280	0.26	+0.4
3,896,729	-	ilvM	Sama_3280	0.26	+0.4
3,896,729	-	ilvM	Sama_3280	0.26	+1.0
3,896,729	-	ilvM	Sama_3280	0.26	+1.3
3,896,787	+	ilvM	Sama_3280	0.49	-0.3
3,896,787	+	ilvM	Sama_3280	0.49	-0.7
3,896,787	+	ilvM	Sama_3280	0.49	-1.5
3,896,787	+	ilvM	Sama_3280	0.49	+1.5
3,896,788	-	ilvM	Sama_3280	0.50	+0.1
3,896,812	+	ilvM	Sama_3280	0.59	+0.0
3,896,813	-	ilvM	Sama_3280	0.60	+1.4
3,896,813	-	ilvM	Sama_3280	0.60	+0.4
3,896,813	-	ilvM	Sama_3280	0.60	-0.4
3,896,813	-	ilvM	Sama_3280	0.60	-0.3
3,896,813	-	ilvM	Sama_3280	0.60	+0.4
3,896,813	-	ilvM	Sama_3280	0.60	+1.0
3,896,813	-	ilvM	Sama_3280	0.60	+0.4
3,896,830	+	ilvM	Sama_3280	0.66	-1.1
3,896,831	-	ilvM	Sama_3280	0.67	+0.6
3,896,831	-	ilvM	Sama_3280	0.67	+1.3
3,896,905	+				-0.3
3,896,905	+				-0.9
3,896,905	+				-1.2
3,896,906	-				+1.3
3,896,940	+				+0.8
3,896,940	+				+0.6
3,896,940	+				-1.0
3,896,940	+				+0.7
3,896,940	+				-0.9
3,896,983	-				-0.4
3,896,995	+				-1.4
3,896,995	+				-1.8
3,896,995	+				+0.0
3,896,995	+				-1.5
3,896,995	+				-0.8
3,896,995	+				-0.7
3,896,996	-				-1.5
3,896,996	-				-0.6
3,896,996	-				-1.0
3,896,996	-				-0.6
3,896,996	-				-1.9
3,896,996	-				-0.8
3,896,996	-				-0.8
3,896,996	-				+0.0
3,896,996	-				-2.8
3,896,996	-				-1.9
3,896,996	-				-0.6
3,897,014	+				+0.3
3,897,014	+				+0.2
3,897,014	+				+0.6
3,897,015	-				+0.2
3,897,015	-				-2.0
3,897,015	-				-0.1
3,897,149	+		Sama_3281	0.14	-1.3
3,897,149	+		Sama_3281	0.14	-1.5
3,897,150	-		Sama_3281	0.14	+0.6
3,897,210	+		Sama_3281	0.18	+0.5
3,897,249	+		Sama_3281	0.20	+1.6
3,897,249	+		Sama_3281	0.20	+0.4
3,897,249	+		Sama_3281	0.20	-1.8
3,897,250	-		Sama_3281	0.20	-1.7
3,897,411	+		Sama_3281	0.30	+0.0
3,897,411	+		Sama_3281	0.30	-1.5
3,897,411	+		Sama_3281	0.30	-1.0
3,897,411	+		Sama_3281	0.30	-1.4
3,897,411	+		Sama_3281	0.30	-1.3
3,897,411	+		Sama_3281	0.30	+0.8
3,897,411	+		Sama_3281	0.30	-0.4
3,897,411	+		Sama_3281	0.30	+0.0
3,897,411	+		Sama_3281	0.30	+0.4
3,897,411	+		Sama_3281	0.30	-0.9
3,897,411	+		Sama_3281	0.30	-1.3
3,897,411	+		Sama_3281	0.30	-0.2
3,897,411	+		Sama_3281	0.30	+1.0
3,897,411	+		Sama_3281	0.30	+0.8
3,897,412	-		Sama_3281	0.30	-0.9
3,897,412	-		Sama_3281	0.30	+0.4
3,897,412	-		Sama_3281	0.30	-1.1
3,897,412	-		Sama_3281	0.30	+0.5
3,897,412	-		Sama_3281	0.30	-0.5
3,897,412	-		Sama_3281	0.30	-0.3
3,897,412	-		Sama_3281	0.30	-0.4
3,897,412	-		Sama_3281	0.30	-0.5
3,897,412	-		Sama_3281	0.30	-0.4
3,897,412	-		Sama_3281	0.30	+0.0
3,897,412	-		Sama_3281	0.30	+0.2
3,897,412	-		Sama_3281	0.30	-1.0
3,897,457	+		Sama_3281	0.33	-0.2
3,897,457	+		Sama_3281	0.33	-0.2
3,897,457	+		Sama_3281	0.33	-1.3
3,897,458	-		Sama_3281	0.33	+0.1
3,897,458	-		Sama_3281	0.33	-0.2
3,897,458	-		Sama_3281	0.33	-1.3
3,897,458	-		Sama_3281	0.33	-0.2
3,897,509	+		Sama_3281	0.36	+1.2
3,897,509	+		Sama_3281	0.36	-0.8
3,897,509	+		Sama_3281	0.36	-0.1
3,897,509	+		Sama_3281	0.36	-0.6
3,897,509	+		Sama_3281	0.36	+3.0
3,897,509	+		Sama_3281	0.36	-0.7
3,897,509	+		Sama_3281	0.36	+0.6
3,897,510	-		Sama_3281	0.36	-0.8
3,897,510	-		Sama_3281	0.36	-0.6
3,897,510	-		Sama_3281	0.36	+0.4
3,897,510	-		Sama_3281	0.36	+0.8
3,897,510	-		Sama_3281	0.36	+0.5
3,897,510	-		Sama_3281	0.36	-1.1
3,897,510	-		Sama_3281	0.36	-2.5
3,897,510	-		Sama_3281	0.36	-0.7
3,897,510	-		Sama_3281	0.36	-0.8
3,897,533	+		Sama_3281	0.37	-0.2
3,897,534	-		Sama_3281	0.37	+1.0
3,897,534	-		Sama_3281	0.37	-0.1
3,897,586	+		Sama_3281	0.40	-0.8
3,897,586	+		Sama_3281	0.40	-0.2
3,897,586	+		Sama_3281	0.40	-1.0
3,897,586	+		Sama_3281	0.40	-1.7
3,897,586	+		Sama_3281	0.40	-0.0
3,897,586	+		Sama_3281	0.40	-0.3
3,897,586	+		Sama_3281	0.40	+0.5
3,897,586	+		Sama_3281	0.40	-0.2
3,897,586	+		Sama_3281	0.40	-1.2
3,897,586	+		Sama_3281	0.40	-0.2
3,897,586	+		Sama_3281	0.40	-1.2
3,897,586	+		Sama_3281	0.40	-1.6
3,897,587	-		Sama_3281	0.40	-0.2
3,897,587	-		Sama_3281	0.40	-0.7
3,897,587	-		Sama_3281	0.40	-0.1
3,897,587	-		Sama_3281	0.40	+0.0
3,897,587	-		Sama_3281	0.40	-2.2
3,897,587	-		Sama_3281	0.40	+0.1
3,897,587	-		Sama_3281	0.40	+0.3
3,897,587	-		Sama_3281	0.40	+0.7
3,897,587	-		Sama_3281	0.40	-1.8
3,897,588	+		Sama_3281	0.41	-1.0
3,897,588	+		Sama_3281	0.41	+0.7
3,897,588	+		Sama_3281	0.41	+1.0
3,897,589	-		Sama_3281	0.41	+0.2
3,897,589	-		Sama_3281	0.41	-0.2
3,897,682	+		Sama_3281	0.46	+0.3
3,897,682	+		Sama_3281	0.46	+0.4
3,897,682	+		Sama_3281	0.46	-0.5
3,897,682	+		Sama_3281	0.46	+0.0
3,897,682	+		Sama_3281	0.46	+0.0
3,897,682	+		Sama_3281	0.46	-0.5
3,897,682	+		Sama_3281	0.46	-1.5
3,897,682	+		Sama_3281	0.46	-0.2
3,897,682	+		Sama_3281	0.46	+0.4
3,897,682	+		Sama_3281	0.46	+0.2
3,897,682	+		Sama_3281	0.46	+0.6
3,897,682	+		Sama_3281	0.46	-2.2
3,897,682	+		Sama_3281	0.46	+0.8
3,897,682	+		Sama_3281	0.46	-0.6
3,897,682	+		Sama_3281	0.46	+1.6
3,897,683	-		Sama_3281	0.46	-1.3
3,897,683	-		Sama_3281	0.46	+0.4
3,897,683	-		Sama_3281	0.46	+1.4
3,897,683	-		Sama_3281	0.46	-2.7
3,897,683	-		Sama_3281	0.46	+0.6
3,897,683	-		Sama_3281	0.46	-0.9
3,897,683	-		Sama_3281	0.46	-0.6
3,897,683	-		Sama_3281	0.46	-0.4
3,897,683	-		Sama_3281	0.46	+1.0
3,897,683	-		Sama_3281	0.46	+0.1
3,897,683	-		Sama_3281	0.46	-0.6
3,897,683	-		Sama_3281	0.46	+0.8
3,897,837	-		Sama_3281	0.55	-0.2
3,897,894	+		Sama_3281	0.59	-0.9
3,897,894	+		Sama_3281	0.59	+0.6
3,897,894	+		Sama_3281	0.59	+0.1
3,897,894	+		Sama_3281	0.59	-0.1
3,897,895	-		Sama_3281	0.59	-1.6
3,897,895	-		Sama_3281	0.59	+1.1
3,897,895	-		Sama_3281	0.59	+0.0
3,897,896	+		Sama_3281	0.59	-0.3
3,897,896	+		Sama_3281	0.59	-0.8
3,897,896	+		Sama_3281	0.59	-1.2
3,897,896	+		Sama_3281	0.59	-1.1
3,897,896	+		Sama_3281	0.59	+0.8
3,897,896	+		Sama_3281	0.59	-2.3
3,897,896	+		Sama_3281	0.59	-1.1
3,897,896	+		Sama_3281	0.59	-0.7
3,897,896	+		Sama_3281	0.59	-0.6
3,897,896	+		Sama_3281	0.59	-1.6
3,897,896	+		Sama_3281	0.59	-0.6
3,897,896	+		Sama_3281	0.59	-0.6
3,897,896	+		Sama_3281	0.59	+0.1
3,897,896	+		Sama_3281	0.59	+0.5
3,897,896	+		Sama_3281	0.59	-1.2
3,897,896	+		Sama_3281	0.59	-0.6
3,897,896	+		Sama_3281	0.59	-1.4
3,897,896	+		Sama_3281	0.59	-0.6
3,897,896	+		Sama_3281	0.59	-1.7
3,897,896	+		Sama_3281	0.59	+1.5
3,897,896	+		Sama_3281	0.59	+1.0
3,897,896	+		Sama_3281	0.59	-0.6
3,897,896	+		Sama_3281	0.59	-0.8
3,897,896	+		Sama_3281	0.59	-0.4
3,897,896	+		Sama_3281	0.59	+0.1
3,897,897	-		Sama_3281	0.59	-2.7
3,897,897	-		Sama_3281	0.59	+0.2
3,897,897	-		Sama_3281	0.59	+2.0
3,897,897	-		Sama_3281	0.59	-0.9
3,897,897	-		Sama_3281	0.59	-0.6
3,897,897	-		Sama_3281	0.59	+0.6
3,897,897	-		Sama_3281	0.59	-2.0
3,897,897	-		Sama_3281	0.59	-1.5
3,897,897	-		Sama_3281	0.59	-0.7
3,897,897	-		Sama_3281	0.59	-0.9
3,897,897	-		Sama_3281	0.59	-0.2
3,897,897	-		Sama_3281	0.59	-0.6
3,897,897	-		Sama_3281	0.59	+0.3
3,897,897	-		Sama_3281	0.59	-0.5
3,897,897	-		Sama_3281	0.59	+1.0
3,897,897	-		Sama_3281	0.59	+0.1
3,897,897	-		Sama_3281	0.59	+0.0
3,897,897	-		Sama_3281	0.59	-0.6
3,897,909	+		Sama_3281	0.60	+2.6
3,897,910	-		Sama_3281	0.60	+0.0