Strain Fitness in Shewanella amazonensis SB2B around Sama_3133

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
3,720,811	+		Sama_3132	0.47	-0.8
3,720,851	+		Sama_3132	0.50	+0.8
3,720,852	-		Sama_3132	0.50	-0.7
3,720,852	-		Sama_3132	0.50	-1.3
3,720,853	+		Sama_3132	0.50	-1.5
3,720,853	+		Sama_3132	0.50	-0.2
3,720,853	+		Sama_3132	0.50	-0.8
3,720,853	+		Sama_3132	0.50	-0.5
3,720,853	+		Sama_3132	0.50	-0.6
3,720,853	+		Sama_3132	0.50	-1.9
3,720,853	+		Sama_3132	0.50	-0.0
3,720,853	+		Sama_3132	0.50	-0.7
3,720,853	+		Sama_3132	0.50	-0.3
3,720,853	+		Sama_3132	0.50	-0.0
3,720,853	+		Sama_3132	0.50	-0.6
3,720,853	+		Sama_3132	0.50	+0.4
3,720,853	+		Sama_3132	0.50	+0.6
3,720,853	+		Sama_3132	0.50	-0.1
3,720,853	+		Sama_3132	0.50	-0.6
3,720,853	+		Sama_3132	0.50	-0.9
3,720,853	+		Sama_3132	0.50	-0.2
3,720,853	+		Sama_3132	0.50	-0.1
3,720,854	-		Sama_3132	0.50	+0.8
3,720,854	-		Sama_3132	0.50	+0.8
3,720,854	-		Sama_3132	0.50	+2.0
3,720,854	-		Sama_3132	0.50	-1.0
3,720,854	-		Sama_3132	0.50	+0.9
3,720,854	-		Sama_3132	0.50	+0.3
3,720,854	-		Sama_3132	0.50	+0.8
3,720,854	-		Sama_3132	0.50	+0.4
3,720,854	-		Sama_3132	0.50	-0.5
3,720,854	-		Sama_3132	0.50	-0.9
3,720,854	-		Sama_3132	0.50	-0.3
3,720,854	-		Sama_3132	0.50	-1.7
3,721,003	+		Sama_3132	0.59	-0.6
3,721,003	+		Sama_3132	0.59	-1.0
3,721,004	-		Sama_3132	0.59	-1.3
3,721,004	-		Sama_3132	0.59	+0.7
3,721,250	+		Sama_3132	0.73	+1.0
3,721,250	+		Sama_3132	0.73	-1.2
3,721,250	+		Sama_3132	0.73	-0.3
3,721,251	-		Sama_3132	0.73	-0.8
3,721,251	-		Sama_3132	0.73	-1.9
3,721,251	-		Sama_3132	0.73	-0.0
3,721,336	+		Sama_3132	0.78	-0.6
3,721,336	+		Sama_3132	0.78	-0.2
3,721,336	+		Sama_3132	0.78	+0.7
3,721,336	+		Sama_3132	0.78	+0.4
3,721,336	+		Sama_3132	0.78	-0.9
3,721,337	-		Sama_3132	0.78	+0.2
3,721,337	-		Sama_3132	0.78	-0.0
3,721,337	-		Sama_3132	0.78	+1.0
3,721,337	-		Sama_3132	0.78	+1.0
3,721,348	-		Sama_3132	0.79	-0.2
3,721,522	-		Sama_3132	0.89	-0.8
3,721,537	+				+0.5
3,721,538	-				+0.1
3,721,614	+				-1.0
3,721,614	+				-0.4
3,721,614	+				-3.0
3,721,614	+				+0.1
3,721,614	+				+0.2
3,721,614	+				-0.0
3,721,614	+				-1.3
3,721,614	+				+0.7
3,721,614	+				+1.0
3,721,614	+				+0.5
3,721,614	+				+0.7
3,721,615	-				+0.5
3,721,615	-				+0.4
3,721,615	-				+0.1
3,721,615	-				+0.1
3,721,615	-				+1.0
3,721,615	-				-1.0
3,721,615	-				-1.1
3,721,615	-				-1.9
3,721,615	-				-0.2
3,721,615	-				-0.1
3,721,615	-				+0.1
3,721,615	-				-1.7
3,721,616	+				-0.5
3,721,616	+				-0.5
3,721,616	+				+0.3
3,721,616	+				-0.5
3,721,616	+				-1.6
3,721,616	+				-0.9
3,721,616	+				-1.6
3,721,616	+				-0.7
3,721,617	-				+0.3
3,721,617	-				+0.2
3,721,617	-				-0.5
3,721,617	-				+1.0
3,721,617	-				+0.1
3,721,617	-				-0.6
3,721,617	-				+1.2
3,721,617	-				+0.8
3,721,617	-				-0.8
3,721,640	+				+0.4
3,721,641	-				-0.3
3,721,687	+				+2.0
3,721,687	+				-1.4
3,721,688	-				-0.3
3,721,688	-				-0.9
3,721,702	+				-0.7
3,721,702	+				-0.9
3,721,702	+				+0.2
3,721,702	+				-0.2
3,721,703	-				+1.9
3,721,703	-				-0.0
3,721,724	+				+0.5
3,721,725	-				-0.2
3,721,725	-				-1.5
3,721,725	-				+0.3
3,721,765	+				-0.7
3,721,766	-				+0.3
3,721,795	+				+0.2
3,721,795	+				-0.4
3,721,796	-				-0.4
3,721,796	-				-0.8
3,721,812	+				-0.4
3,721,812	+				-0.2
3,721,813	-				-0.6
3,721,813	-				-0.6
3,721,921	+		Sama_3133	0.14	-1.9
3,721,922	-		Sama_3133	0.15	-1.5
3,722,004	+		Sama_3133	0.24	-0.2
3,722,031	-		Sama_3133	0.27	-0.8
3,722,093	+		Sama_3133	0.33	-1.7
3,722,094	-		Sama_3133	0.33	+2.4
3,722,116	-		Sama_3133	0.36	+0.4
3,722,122	-		Sama_3133	0.37	-1.1
3,722,313	-		Sama_3133	0.57	-0.0
3,722,313	-		Sama_3133	0.57	-1.4
3,722,323	+		Sama_3133	0.59	-0.4
3,722,337	+		Sama_3133	0.60	-0.5
3,722,337	+		Sama_3133	0.60	+0.4
3,722,338	-		Sama_3133	0.60	-0.6
3,722,590	+		Sama_3133	0.88	-0.2
3,722,590	+		Sama_3133	0.88	-1.7
3,722,591	-		Sama_3133	0.88	+0.1
3,722,616	+				-0.2
3,722,617	-				-0.2
3,722,728	+				-1.7
3,722,729	-				+0.1
3,722,765	-		Sama_3134	0.13	-0.2
3,722,765	-		Sama_3134	0.13	-0.8
3,722,766	+		Sama_3134	0.13	-2.5
3,722,766	+		Sama_3134	0.13	+1.0
3,722,766	+		Sama_3134	0.13	-0.1
3,722,766	+		Sama_3134	0.13	+3.0
3,722,766	+		Sama_3134	0.13	+0.8
3,722,766	+		Sama_3134	0.13	-0.3
3,722,766	+		Sama_3134	0.13	-0.6
3,722,766	+		Sama_3134	0.13	+0.8
3,722,766	+		Sama_3134	0.13	-0.2
3,722,766	+		Sama_3134	0.13	-0.8
3,722,767	-		Sama_3134	0.13	-1.3
3,722,767	-		Sama_3134	0.13	-0.8
3,722,767	-		Sama_3134	0.13	+0.7
3,722,767	-		Sama_3134	0.13	-0.1
3,722,767	-		Sama_3134	0.13	-1.0
3,722,767	-		Sama_3134	0.13	-1.6
3,722,767	-		Sama_3134	0.13	+0.6
3,722,767	-		Sama_3134	0.13	-1.2
3,722,767	-		Sama_3134	0.13	+1.6
3,722,767	-		Sama_3134	0.13	-0.4
3,722,767	-		Sama_3134	0.13	-0.1
3,722,767	-		Sama_3134	0.13	-2.0
3,722,767	-		Sama_3134	0.13	-0.1
3,722,767	-		Sama_3134	0.13	-0.5
3,722,767	-		Sama_3134	0.13	-0.7
3,722,767	-		Sama_3134	0.13	+0.3
3,722,767	-		Sama_3134	0.13	+0.9
3,722,767	-		Sama_3134	0.13	-0.5
3,722,767	-		Sama_3134	0.13	-1.4
3,722,767	-		Sama_3134	0.13	-0.3
3,722,767	-		Sama_3134	0.13	-0.6
3,722,767	-		Sama_3134	0.13	-0.6
3,722,767	-		Sama_3134	0.13	+1.2
3,722,794	+		Sama_3134	0.18	+1.0
3,722,824	+		Sama_3134	0.24	-0.0
3,722,873	+		Sama_3134	0.34	-1.5
3,722,873	+		Sama_3134	0.34	+1.6
3,722,873	+		Sama_3134	0.34	-1.6
3,722,873	+		Sama_3134	0.34	+1.0
3,722,874	-		Sama_3134	0.34	-0.0
3,722,874	-		Sama_3134	0.34	+0.7
3,722,885	-		Sama_3134	0.37	-0.6
3,722,938	+		Sama_3134	0.47	-0.3
3,722,939	-		Sama_3134	0.47	+0.1
3,722,950	-		Sama_3134	0.50	-1.1
3,722,950	-		Sama_3134	0.50	-1.3
3,722,976	-		Sama_3134	0.55	+0.7
3,723,032	-		Sama_3134	0.66	+0.8
3,723,060	+		Sama_3134	0.71	-0.8
3,723,061	-		Sama_3134	0.72	-0.6
3,723,109	+		Sama_3134	0.81	-0.9
3,723,110	-		Sama_3134	0.81	-1.2
3,723,110	-		Sama_3134	0.81	-0.3
3,723,133	+		Sama_3134	0.86	+0.5
3,723,133	+		Sama_3134	0.86	-1.3
3,723,133	+		Sama_3134	0.86	-2.6
3,723,134	-		Sama_3134	0.86	+0.9
3,723,134	-		Sama_3134	0.86	+1.0
3,723,222	-				-0.6
3,723,227	+				-2.0
3,723,227	+				+0.3
3,723,228	-				+0.4
3,723,264	+				+0.4
3,723,265	-				-0.5
3,723,300	+				-0.7
3,723,301	-				-0.7
3,723,324	+				-2.2
3,723,324	+				-1.7
3,723,324	+				-2.4
3,723,325	-				-1.7
3,723,340	+				-0.0
3,723,399	+		Sama_3135	0.12	-0.5
3,723,399	+		Sama_3135	0.12	-0.8
3,723,399	+		Sama_3135	0.12	-0.9
3,723,399	+		Sama_3135	0.12	-1.0
3,723,400	-		Sama_3135	0.13	+1.6
3,723,430	+		Sama_3135	0.16	-0.1
3,723,430	+		Sama_3135	0.16	+0.1
3,723,431	-		Sama_3135	0.16	-1.4
3,723,431	-		Sama_3135	0.16	-1.5
3,723,445	+		Sama_3135	0.18	-0.2
3,723,445	+		Sama_3135	0.18	-0.2
3,723,445	+		Sama_3135	0.18	-0.6
3,723,497	+		Sama_3135	0.25	-1.8
3,723,497	+		Sama_3135	0.25	+0.1
3,723,498	-		Sama_3135	0.25	-0.6
3,723,498	-		Sama_3135	0.25	-0.2
3,723,498	-		Sama_3135	0.25	+0.3
3,723,529	+		Sama_3135	0.29	-0.7
3,723,529	+		Sama_3135	0.29	-1.4
3,723,530	-		Sama_3135	0.29	+3.3
3,723,632	+		Sama_3135	0.41	+0.6
3,723,633	-		Sama_3135	0.41	-0.2
3,723,691	+		Sama_3135	0.49	-0.3
3,723,692	-		Sama_3135	0.49	-0.1