Strain Fitness in Shewanella amazonensis SB2B around Sama_3126

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
3,706,199	-				+0.6
3,706,199	-				+2.0
3,706,207	-				+0.4
3,706,207	-				+1.4
3,706,580	-				+1.1
3,706,580	-				+0.2
3,706,580	-				+0.2
3,706,580	-				-0.6
3,706,580	-				+0.1
3,706,580	-				+1.0
3,706,580	-				+0.5
3,706,580	-				+0.2
3,706,580	-				+1.6
3,706,580	-				-0.2
3,706,582	-				-0.3
3,706,582	-				-0.0
3,706,674	-				+0.5
3,706,674	-				+0.6
3,708,047	+				-1.0
3,708,047	+				-1.5
3,708,047	+				+0.3
3,708,047	+				+0.4
3,708,047	+				+0.7
3,708,048	-				+0.2
3,708,048	-				-0.1
3,708,048	-				-0.1
3,708,052	+				-0.3
3,708,081	+				-1.3
3,708,101	-				-0.0
3,708,101	-				-0.3
3,708,114	+				+0.8
3,708,129	-				-0.0
3,708,171	-				+0.2
3,708,262	+		Sama_3127	0.12	+0.4
3,708,301	+		Sama_3127	0.19	-0.6
3,708,301	+		Sama_3127	0.19	-1.6
3,708,301	+		Sama_3127	0.19	-0.8
3,708,302	-		Sama_3127	0.19	-0.6
3,708,302	-		Sama_3127	0.19	-0.9
3,708,355	+		Sama_3127	0.29	+0.4
3,708,355	+		Sama_3127	0.29	+0.7
3,708,356	-		Sama_3127	0.29	-0.8
3,708,393	+		Sama_3127	0.36	-1.6
3,708,472	-		Sama_3127	0.51	-0.8
3,708,496	+		Sama_3127	0.55	+0.1
3,708,712	-				+0.7
3,708,779	+				-0.5
3,708,779	+				-0.8
3,708,779	+				+0.3
3,708,779	+				-1.3
3,708,779	+				-0.5
3,708,779	+				-0.6
3,708,779	+				-0.7
3,708,779	+				+0.5
3,708,779	+				+0.8
3,708,780	-				-3.0
3,708,780	-				-1.0
3,708,780	-				+0.4
3,708,780	-				+0.4
3,708,780	-				-1.5
3,708,780	-				-0.7
3,708,780	-				-0.0
3,708,782	+				-0.7
3,708,782	+				+0.3
3,708,782	+				+1.0
3,708,782	+				-0.4
3,708,782	+				+0.1
3,708,782	+				+1.1
3,708,782	+				-0.5
3,708,783	-				-1.2
3,708,783	-				-0.8
3,708,783	-				-0.0
3,708,783	-				-0.9
3,708,824	+				-0.1
3,708,936	-				+0.7
3,708,976	-				+1.0
3,709,025	+				+0.7
3,709,025	+				-0.5
3,709,026	-				+1.0