Strain Fitness in Shewanella amazonensis SB2B around Sama_3028

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
3,601,944	+	mutL	Sama_3027	0.50	+0.2
3,601,945	-	mutL	Sama_3027	0.50	-0.8
3,601,945	-	mutL	Sama_3027	0.50	+1.4
3,601,945	-	mutL	Sama_3027	0.50	+0.5
3,601,970	+	mutL	Sama_3027	0.51	-1.2
3,601,971	-	mutL	Sama_3027	0.51	-0.6
3,601,984	+	mutL	Sama_3027	0.52	-0.8
3,601,985	-	mutL	Sama_3027	0.52	+1.6
3,601,985	-	mutL	Sama_3027	0.52	+0.0
3,601,985	-	mutL	Sama_3027	0.52	-0.2
3,602,115	+	mutL	Sama_3027	0.59	-1.6
3,602,161	+	mutL	Sama_3027	0.61	+0.1
3,602,161	+	mutL	Sama_3027	0.61	-0.2
3,602,161	+	mutL	Sama_3027	0.61	-0.7
3,602,161	+	mutL	Sama_3027	0.61	+0.5
3,602,162	-	mutL	Sama_3027	0.61	+0.8
3,602,162	-	mutL	Sama_3027	0.61	+1.6
3,602,162	-	mutL	Sama_3027	0.61	+1.0
3,602,162	-	mutL	Sama_3027	0.61	+0.9
3,602,167	+	mutL	Sama_3027	0.61	-0.2
3,602,205	+	mutL	Sama_3027	0.63	+1.0
3,602,205	+	mutL	Sama_3027	0.63	+0.7
3,602,205	+	mutL	Sama_3027	0.63	+0.4
3,602,205	+	mutL	Sama_3027	0.63	-0.6
3,602,206	-	mutL	Sama_3027	0.63	+0.1
3,602,206	-	mutL	Sama_3027	0.63	-0.3
3,602,206	-	mutL	Sama_3027	0.63	-0.8
3,602,206	-	mutL	Sama_3027	0.63	-0.1
3,602,209	+	mutL	Sama_3027	0.63	+1.0
3,602,209	+	mutL	Sama_3027	0.63	+0.0
3,602,209	+	mutL	Sama_3027	0.63	+0.8
3,602,210	-	mutL	Sama_3027	0.63	+1.0
3,602,210	-	mutL	Sama_3027	0.63	+0.4
3,602,302	+	mutL	Sama_3027	0.68	+0.0
3,602,303	-	mutL	Sama_3027	0.68	+1.0
3,602,303	-	mutL	Sama_3027	0.68	+2.5
3,602,309	+	mutL	Sama_3027	0.68	-1.2
3,602,382	+	mutL	Sama_3027	0.72	-0.4
3,602,414	+	mutL	Sama_3027	0.74	+2.0
3,602,414	+	mutL	Sama_3027	0.74	+1.0
3,602,414	+	mutL	Sama_3027	0.74	-1.3
3,602,465	+	mutL	Sama_3027	0.76	-0.6
3,602,468	+	mutL	Sama_3027	0.77	+0.2
3,602,468	+	mutL	Sama_3027	0.77	+0.2
3,602,469	-	mutL	Sama_3027	0.77	+0.4
3,602,469	-	mutL	Sama_3027	0.77	-1.3
3,602,469	-	mutL	Sama_3027	0.77	+2.0
3,602,498	+	mutL	Sama_3027	0.78	-0.8
3,602,499	-	mutL	Sama_3027	0.78	-0.7
3,602,499	-	mutL	Sama_3027	0.78	-0.8
3,602,555	-	mutL	Sama_3027	0.81	-1.0
3,602,621	+	mutL	Sama_3027	0.84	+0.6
3,602,621	+	mutL	Sama_3027	0.84	-0.3
3,602,622	-	mutL	Sama_3027	0.84	-0.2
3,602,622	-	mutL	Sama_3027	0.84	-0.7
3,602,622	-	mutL	Sama_3027	0.84	+0.4
3,602,760	-				+0.0
3,602,766	-				+0.1
3,602,796	-				+0.0
3,602,845	-				-0.3
3,602,865	+				+0.9
3,602,866	-				-0.8
3,602,930	-				-1.1
3,602,930	-				-0.2
3,602,989	+				+0.2
3,602,989	+				-1.1
3,602,989	+				-0.8
3,602,989	+				-1.6
3,602,990	-				-0.5
3,602,990	-				+0.5
3,602,990	-				+2.0
3,603,031	-				+0.0
3,603,031	-				+0.1
3,604,233	-				-1.5
3,604,235	+				+0.4
3,604,241	-				-0.8
3,604,241	-				+1.3
3,604,262	-				+2.0
3,604,719	-				-0.4
3,604,719	-				-1.9
3,604,758	-				+1.0
3,604,758	-				-0.8
3,604,758	-				-0.1
3,604,760	-				-0.5
3,604,760	-				+1.4
3,604,773	-				-0.3
3,604,778	-				+6.2
3,604,786	-				-1.9
3,604,804	-				-0.2
3,604,804	-				-0.6
3,604,926	+		Sama_3030	0.10	-1.3
3,604,940	-		Sama_3030	0.11	+2.0
3,604,940	-		Sama_3030	0.11	+0.1
3,604,940	-		Sama_3030	0.11	+0.4
3,604,941	+		Sama_3030	0.11	-0.9
3,604,942	-		Sama_3030	0.11	+1.4
3,604,942	-		Sama_3030	0.11	-1.5
3,604,948	+		Sama_3030	0.12	+0.4
3,604,948	+		Sama_3030	0.12	+0.2
3,604,948	+		Sama_3030	0.12	+0.0
3,604,949	-		Sama_3030	0.12	-0.1
3,604,949	-		Sama_3030	0.12	+1.0
3,605,011	-		Sama_3030	0.16	-0.1
3,605,011	-		Sama_3030	0.16	-0.3
3,605,021	+		Sama_3030	0.17	+0.2
3,605,021	+		Sama_3030	0.17	-2.6
3,605,021	+		Sama_3030	0.17	-1.0
3,605,022	-		Sama_3030	0.17	-1.1
3,605,025	+		Sama_3030	0.17	+1.4
3,605,025	+		Sama_3030	0.17	-0.5
3,605,025	+		Sama_3030	0.17	-1.5
3,605,025	+		Sama_3030	0.17	-0.4
3,605,025	+		Sama_3030	0.17	+0.4
3,605,025	+		Sama_3030	0.17	+0.0
3,605,025	+		Sama_3030	0.17	-0.7
3,605,025	+		Sama_3030	0.17	+0.7
3,605,026	-		Sama_3030	0.17	+1.6
3,605,026	-		Sama_3030	0.17	-0.6
3,605,026	-		Sama_3030	0.17	-2.0
3,605,026	-		Sama_3030	0.17	+0.2
3,605,026	-		Sama_3030	0.17	+0.0
3,605,026	-		Sama_3030	0.17	-0.8
3,605,026	-		Sama_3030	0.17	+0.4
3,605,026	-		Sama_3030	0.17	-0.4
3,605,026	-		Sama_3030	0.17	+0.8
3,605,031	+		Sama_3030	0.17	-1.0
3,605,031	+		Sama_3030	0.17	+0.3
3,605,031	+		Sama_3030	0.17	-0.6
3,605,031	+		Sama_3030	0.17	+0.4
3,605,032	-		Sama_3030	0.18	-0.6
3,605,032	-		Sama_3030	0.18	+1.6
3,605,032	-		Sama_3030	0.18	+0.8
3,605,032	-		Sama_3030	0.18	+0.1
3,605,032	-		Sama_3030	0.18	+1.0
3,605,032	-		Sama_3030	0.18	-0.3
3,605,074	+		Sama_3030	0.20	+0.3
3,605,074	+		Sama_3030	0.20	+0.8
3,605,075	-		Sama_3030	0.20	-0.6
3,605,075	-		Sama_3030	0.20	-0.6
3,605,075	-		Sama_3030	0.20	+0.3
3,605,107	+		Sama_3030	0.23	-0.8
3,605,107	+		Sama_3030	0.23	+0.3
3,605,198	-		Sama_3030	0.29	+0.0
3,605,236	-		Sama_3030	0.31	+0.7