Strain Fitness in Shewanella amazonensis SB2B around Sama_3026

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
3,599,117	-		Sama_3024	0.59	-0.7
3,599,140	-		Sama_3024	0.60	-0.3
3,599,140	-		Sama_3024	0.60	+0.0
3,599,140	-		Sama_3024	0.60	-0.8
3,599,299	-		Sama_3024	0.72	-0.3
3,599,299	-		Sama_3024	0.72	-1.9
3,599,299	-		Sama_3024	0.72	+0.6
3,599,299	-		Sama_3024	0.72	-0.6
3,599,299	-		Sama_3024	0.72	-0.8
3,599,419	-		Sama_3024	0.82	-0.7
3,599,524	-		Sama_3024	0.90	+0.3
3,599,524	-		Sama_3024	0.90	-0.3
3,599,524	-		Sama_3024	0.90	+2.6
3,599,524	-		Sama_3024	0.90	-1.8
3,599,646	-				+1.6
3,599,729	-		Sama_3025	0.14	+0.3
3,599,729	-		Sama_3025	0.14	-1.7
3,599,729	-		Sama_3025	0.14	+0.4
3,600,032	-				-0.6
3,600,111	-				+0.0
3,600,983	-				-0.3
3,600,990	+				-1.2
3,600,991	-				-0.8
3,600,991	-				+1.8
3,600,991	-				-0.1
3,600,991	-				-0.4
3,600,991	-				+0.2
3,600,991	-				+1.4
3,600,991	-				-1.6
3,600,991	-				+0.1
3,600,991	-				+0.0
3,601,035	-				-0.8
3,601,065	-				-1.6
3,601,150	-				+4.3
3,601,156	-				-0.7
3,601,208	-	mutL	Sama_3027	0.12	-0.3
3,601,240	+	mutL	Sama_3027	0.14	+0.7
3,601,241	-	mutL	Sama_3027	0.14	+1.1
3,601,296	+	mutL	Sama_3027	0.17	-0.3
3,601,296	+	mutL	Sama_3027	0.17	-0.2
3,601,297	-	mutL	Sama_3027	0.17	+1.6
3,601,377	+	mutL	Sama_3027	0.21	+1.3
3,601,380	+	mutL	Sama_3027	0.21	-1.5
3,601,380	+	mutL	Sama_3027	0.21	-1.0
3,601,380	+	mutL	Sama_3027	0.21	-1.3
3,601,380	+	mutL	Sama_3027	0.21	+0.0
3,601,381	-	mutL	Sama_3027	0.21	-1.4
3,601,390	-	mutL	Sama_3027	0.21	+0.4
3,601,415	+	mutL	Sama_3027	0.23	-0.9
3,601,416	-	mutL	Sama_3027	0.23	+1.4
3,601,518	+	mutL	Sama_3027	0.28	+1.4
3,601,518	+	mutL	Sama_3027	0.28	+0.4
3,601,549	+	mutL	Sama_3027	0.30	+0.6
3,601,549	+	mutL	Sama_3027	0.30	-0.2
3,601,550	-	mutL	Sama_3027	0.30	-0.4
3,601,550	-	mutL	Sama_3027	0.30	-0.6
3,601,550	-	mutL	Sama_3027	0.30	-0.8
3,601,550	-	mutL	Sama_3027	0.30	+0.2
3,601,553	-	mutL	Sama_3027	0.30	-0.6
3,601,597	+	mutL	Sama_3027	0.32	-1.8
3,601,597	+	mutL	Sama_3027	0.32	-0.8
3,601,597	+	mutL	Sama_3027	0.32	-1.2
3,601,597	+	mutL	Sama_3027	0.32	+1.0
3,601,597	+	mutL	Sama_3027	0.32	+1.4
3,601,597	+	mutL	Sama_3027	0.32	+1.3
3,601,598	-	mutL	Sama_3027	0.32	-1.0
3,601,598	-	mutL	Sama_3027	0.32	-2.0
3,601,598	-	mutL	Sama_3027	0.32	+1.0
3,601,598	-	mutL	Sama_3027	0.32	-0.6
3,601,598	-	mutL	Sama_3027	0.32	+0.8
3,601,598	-	mutL	Sama_3027	0.32	+0.7
3,601,598	-	mutL	Sama_3027	0.32	+0.4
3,601,598	-	mutL	Sama_3027	0.32	+3.0
3,601,598	-	mutL	Sama_3027	0.32	-0.8
3,601,598	-	mutL	Sama_3027	0.32	-0.2
3,601,598	-	mutL	Sama_3027	0.32	-1.0
3,601,624	+	mutL	Sama_3027	0.33	-0.2
3,601,625	-	mutL	Sama_3027	0.33	+1.3
3,601,739	+	mutL	Sama_3027	0.39	+0.6
3,601,739	+	mutL	Sama_3027	0.39	+0.4
3,601,739	+	mutL	Sama_3027	0.39	-1.7
3,601,740	-	mutL	Sama_3027	0.39	+2.4
3,601,740	-	mutL	Sama_3027	0.39	+1.3
3,601,802	+	mutL	Sama_3027	0.42	+0.8
3,601,802	+	mutL	Sama_3027	0.42	-2.0
3,601,802	+	mutL	Sama_3027	0.42	-0.9
3,601,841	+	mutL	Sama_3027	0.44	+3.4
3,601,842	-	mutL	Sama_3027	0.45	+0.4
3,601,842	-	mutL	Sama_3027	0.45	-0.4
3,601,847	+	mutL	Sama_3027	0.45	+1.0
3,601,847	+	mutL	Sama_3027	0.45	+0.4
3,601,847	+	mutL	Sama_3027	0.45	-0.5
3,601,848	-	mutL	Sama_3027	0.45	+0.3
3,601,848	-	mutL	Sama_3027	0.45	-1.6
3,601,849	+	mutL	Sama_3027	0.45	-0.1
3,601,849	+	mutL	Sama_3027	0.45	-2.2
3,601,849	+	mutL	Sama_3027	0.45	-1.4
3,601,850	-	mutL	Sama_3027	0.45	+0.4
3,601,850	-	mutL	Sama_3027	0.45	+0.7
3,601,850	-	mutL	Sama_3027	0.45	+0.7
3,601,850	-	mutL	Sama_3027	0.45	-1.7
3,601,850	-	mutL	Sama_3027	0.45	+0.2
3,601,868	+	mutL	Sama_3027	0.46	+1.4
3,601,868	+	mutL	Sama_3027	0.46	-2.0
3,601,868	+	mutL	Sama_3027	0.46	-1.9
3,601,868	+	mutL	Sama_3027	0.46	-1.2
3,601,869	-	mutL	Sama_3027	0.46	-1.6
3,601,869	-	mutL	Sama_3027	0.46	-0.3
3,601,869	-	mutL	Sama_3027	0.46	+1.5
3,601,944	+	mutL	Sama_3027	0.50	+0.2
3,601,945	-	mutL	Sama_3027	0.50	-0.8
3,601,945	-	mutL	Sama_3027	0.50	+1.4
3,601,945	-	mutL	Sama_3027	0.50	+0.5
3,601,970	+	mutL	Sama_3027	0.51	-1.2