Strain Fitness in Shewanella amazonensis SB2B around Sama_2959

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
3,522,522	+		Sama_2958	0.55	+0.9
3,522,523	-		Sama_2958	0.55	+3.0
3,522,523	-		Sama_2958	0.55	-1.2
3,522,523	-		Sama_2958	0.55	+1.2
3,522,600	+		Sama_2958	0.76	-1.1
3,522,600	+		Sama_2958	0.76	-0.3
3,522,600	+		Sama_2958	0.76	-0.2
3,522,600	+		Sama_2958	0.76	-1.7
3,522,600	+		Sama_2958	0.76	-0.9
3,522,600	+		Sama_2958	0.76	+1.0
3,522,600	+		Sama_2958	0.76	+0.1
3,522,600	+		Sama_2958	0.76	-2.2
3,522,600	+		Sama_2958	0.76	+0.2
3,522,600	+		Sama_2958	0.76	+0.1
3,522,600	+		Sama_2958	0.76	+0.5
3,522,600	+		Sama_2958	0.76	+2.0
3,522,600	+		Sama_2958	0.76	-0.4
3,522,600	+		Sama_2958	0.76	+0.2
3,522,600	+		Sama_2958	0.76	-1.1
3,522,600	+		Sama_2958	0.76	-0.1
3,522,600	+		Sama_2958	0.76	-0.8
3,522,601	-		Sama_2958	0.77	+0.6
3,522,601	-		Sama_2958	0.77	-2.0
3,522,601	-		Sama_2958	0.77	-0.5
3,522,601	-		Sama_2958	0.77	-2.4
3,522,601	-		Sama_2958	0.77	-0.1
3,522,601	-		Sama_2958	0.77	+1.1
3,522,601	-		Sama_2958	0.77	-0.6
3,522,601	-		Sama_2958	0.77	-1.5
3,522,601	-		Sama_2958	0.77	+0.4
3,522,602	+		Sama_2958	0.77	+0.3
3,522,602	+		Sama_2958	0.77	-0.5
3,522,603	-		Sama_2958	0.77	-0.6
3,522,603	-		Sama_2958	0.77	-0.2
3,522,603	-		Sama_2958	0.77	+0.9
3,522,648	-		Sama_2958	0.89	-0.3
3,522,719	-				+0.3
3,522,747	-				+0.5
3,522,747	-				+0.2
3,522,747	-				+0.6
3,522,820	+				+0.8
3,522,853	+				+0.5
3,522,854	-				-2.1
3,522,974	-				+0.3
3,522,974	-				+1.3
3,522,995	-				+0.5
3,523,012	+				+0.1
3,523,012	+				-0.4
3,523,013	-				+0.3
3,523,015	+				-0.4
3,523,015	+				+0.1
3,523,020	+				-0.6
3,523,020	+				+1.3
3,523,020	+				+1.5
3,523,020	+				-0.4
3,523,021	-				-0.8
3,523,021	-				-1.0
3,523,021	-				+2.0
3,523,025	+				+2.3
3,523,025	+				+1.4
3,523,026	-				-1.5
3,523,026	-				-1.5
3,523,026	-				+0.9
3,523,145	+				+1.4
3,523,145	+				-0.0
3,523,146	-				+0.4
3,523,278	-				-0.4
3,523,311	-				-1.3
3,523,330	+				-1.8
3,523,330	+				+0.3
3,523,330	+				+0.7
3,523,330	+				+0.7
3,523,330	+				-0.3
3,523,330	+				-1.4
3,523,331	-				+0.2
3,523,333	-				-0.3
3,523,333	-				-0.0
3,523,335	-				-1.0
3,523,443	+				+2.0
3,523,459	+				+1.6
3,523,522	+				-0.6
3,523,525	+				+1.0
3,523,533	+				+1.0
3,523,552	-				+1.3
3,523,649	-		Sama_2959	0.13	+1.7
3,523,649	-		Sama_2959	0.13	+1.6
3,523,649	-		Sama_2959	0.13	-0.3
3,523,692	-		Sama_2959	0.16	-0.3
3,523,692	-		Sama_2959	0.16	-1.2
3,523,758	-		Sama_2959	0.21	+0.1
3,523,770	-		Sama_2959	0.22	+0.2
3,523,794	+		Sama_2959	0.24	+1.5
3,523,794	+		Sama_2959	0.24	+0.3
3,523,795	-		Sama_2959	0.24	-0.3
3,523,815	+		Sama_2959	0.26	-0.2
3,523,848	+		Sama_2959	0.28	+0.9
3,523,952	+		Sama_2959	0.36	+2.0
3,523,953	-		Sama_2959	0.36	+1.8
3,524,012	-		Sama_2959	0.40	+0.4
3,524,040	-		Sama_2959	0.42	+0.2
3,524,096	-		Sama_2959	0.46	+0.4
3,524,096	-		Sama_2959	0.46	+1.0
3,524,096	-		Sama_2959	0.46	+0.4
3,524,098	-		Sama_2959	0.46	+1.8
3,524,113	-		Sama_2959	0.48	+1.0
3,524,181	+		Sama_2959	0.53	+0.8
3,524,187	+		Sama_2959	0.53	-0.9
3,524,260	-		Sama_2959	0.58	-0.5
3,524,326	+		Sama_2959	0.63	-0.0
3,524,328	+		Sama_2959	0.63	+0.1
3,524,329	-		Sama_2959	0.64	-0.4
3,524,386	+		Sama_2959	0.68	-0.3
3,524,412	-		Sama_2959	0.70	+0.2
3,524,420	+		Sama_2959	0.70	-0.7
3,524,528	-		Sama_2959	0.78	+1.6
3,524,552	-		Sama_2959	0.80	+0.3
3,524,589	-		Sama_2959	0.83	+0.1
3,524,590	+		Sama_2959	0.83	+1.8
3,524,612	-		Sama_2959	0.84	+0.9
3,524,646	-		Sama_2959	0.87	-1.7
3,524,662	+		Sama_2959	0.88	-1.0
3,524,663	-		Sama_2959	0.88	-0.6
3,524,663	-		Sama_2959	0.88	-0.9
3,524,663	-		Sama_2959	0.88	-0.8
3,524,670	-		Sama_2959	0.89	+0.4
3,524,728	+				-0.4
3,524,728	+				-0.6
3,524,763	+				-1.6
3,524,847	-				-0.1
3,524,863	+				+1.3
3,524,903	+				-0.2
3,524,904	-				-0.3
3,524,932	-				-0.9
3,524,945	-		Sama_2960	0.11	-0.1
3,525,107	-		Sama_2960	0.29	-2.0
3,525,387	-		Sama_2960	0.61	-0.5
3,525,387	-		Sama_2960	0.61	-0.1
3,525,515	+		Sama_2960	0.76	-1.6
3,525,524	-		Sama_2960	0.77	+2.4
3,525,568	-		Sama_2960	0.82	+0.8
3,525,608	+		Sama_2960	0.86	-0.6
3,525,608	+		Sama_2960	0.86	+0.4
3,525,608	+		Sama_2960	0.86	-0.4
3,525,609	-		Sama_2960	0.86	-1.0
3,525,635	-		Sama_2960	0.89	-0.5
3,525,640	+		Sama_2960	0.90	-0.6
3,525,662	+				+1.7
3,525,663	-				-0.4
3,525,666	+				-0.3
3,525,666	+				+1.4
3,525,667	-				-0.7
3,525,667	-				-0.6
3,525,673	+				+0.7
3,525,673	+				-0.0
3,525,673	+				+0.9
3,525,673	+				+0.4
3,525,674	-				-0.5
3,525,675	+				+1.0
3,525,675	+				+0.3
3,525,687	+				-0.1
3,525,695	+				-0.9
3,525,695	+				-1.5
3,525,696	-				+2.0
3,525,711	+				+1.0
3,525,711	+				+1.4
3,525,711	+				+0.3
3,525,712	-				+0.3
3,525,716	+				+0.4
3,525,716	+				-2.2
3,525,716	+				-1.5
3,525,770	-				+0.2