Strain Fitness in Shewanella amazonensis SB2B around Sama_2758
Experiment: Carbenicillin 0.00195312 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbenicillin 0.00195312 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,297,647 | - | +0.4 | |||
3,297,702 | + | +0.0 | |||
3,297,910 | - | Sama_2758 | 0.19 | -1.2 | |
3,298,328 | - | Sama_2758 | 0.60 | -1.3 | |
3,298,328 | - | Sama_2758 | 0.60 | -0.3 | |
3,298,369 | - | Sama_2758 | 0.64 | -0.3 | |
3,298,375 | - | Sama_2758 | 0.65 | +0.0 | |
3,298,455 | + | Sama_2758 | 0.73 | +2.0 | |
3,298,456 | - | Sama_2758 | 0.73 | +2.0 | |
3,298,456 | - | Sama_2758 | 0.73 | +0.4 | |
3,298,730 | + | -0.8 | |||
3,298,731 | - | -0.3 | |||
3,298,731 | - | +0.3 | |||
3,298,731 | - | +0.0 |
Or see this region's nucleotide sequence