Strain Fitness in Shewanella amazonensis SB2B around Sama_2703

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
3,233,320	+		Sama_2702	0.25	+1.8
3,233,320	+		Sama_2702	0.25	-1.7
3,233,320	+		Sama_2702	0.25	-0.3
3,233,320	+		Sama_2702	0.25	-0.3
3,233,320	+		Sama_2702	0.25	-0.6
3,233,320	+		Sama_2702	0.25	+0.8
3,233,320	+		Sama_2702	0.25	-1.5
3,233,320	+		Sama_2702	0.25	+2.0
3,233,320	+		Sama_2702	0.25	-0.8
3,233,321	-		Sama_2702	0.25	-1.2
3,233,321	-		Sama_2702	0.25	+0.2
3,233,321	-		Sama_2702	0.25	-1.6
3,233,321	-		Sama_2702	0.25	-0.4
3,233,321	-		Sama_2702	0.25	-0.8
3,233,321	-		Sama_2702	0.25	+0.2
3,233,321	-		Sama_2702	0.25	-0.7
3,233,324	+		Sama_2702	0.25	-2.5
3,233,324	+		Sama_2702	0.25	-0.9
3,233,325	-		Sama_2702	0.25	+0.4
3,233,325	-		Sama_2702	0.25	-0.0
3,233,325	-		Sama_2702	0.25	-0.6
3,233,325	-		Sama_2702	0.25	-1.7
3,233,347	+		Sama_2702	0.27	-1.3
3,233,348	-		Sama_2702	0.27	+1.3
3,233,348	-		Sama_2702	0.27	-1.2
3,233,393	-		Sama_2702	0.31	-0.4
3,233,426	+		Sama_2702	0.34	+0.6
3,233,427	-		Sama_2702	0.34	+0.4
3,233,438	+		Sama_2702	0.35	-1.5
3,233,438	+		Sama_2702	0.35	+0.0
3,233,439	-		Sama_2702	0.35	+0.1
3,233,439	-		Sama_2702	0.35	-1.5
3,233,484	+		Sama_2702	0.39	+0.7
3,233,485	-		Sama_2702	0.39	-0.5
3,233,485	-		Sama_2702	0.39	-1.5
3,233,485	-		Sama_2702	0.39	+0.4
3,233,498	-		Sama_2702	0.40	-0.6
3,233,638	+		Sama_2702	0.53	-0.9
3,233,638	+		Sama_2702	0.53	-1.3
3,233,639	-		Sama_2702	0.53	-1.7
3,233,657	+		Sama_2702	0.55	+1.0
3,233,658	-		Sama_2702	0.55	+0.0
3,233,673	+		Sama_2702	0.56	-0.0
3,233,673	+		Sama_2702	0.56	-0.2
3,233,673	+		Sama_2702	0.56	+0.4
3,233,674	-		Sama_2702	0.56	+0.2
3,233,703	-		Sama_2702	0.59	+0.3
3,233,703	-		Sama_2702	0.59	-0.4
3,233,703	-		Sama_2702	0.59	-1.3
3,233,723	-		Sama_2702	0.60	-1.2
3,233,748	-		Sama_2702	0.63	-1.5
3,233,761	+		Sama_2702	0.64	+0.7
3,233,762	-		Sama_2702	0.64	+1.0
3,233,769	+		Sama_2702	0.65	-0.8
3,233,769	+		Sama_2702	0.65	+0.8
3,233,846	+		Sama_2702	0.71	-1.3
3,233,847	-		Sama_2702	0.71	-0.8
3,233,875	+		Sama_2702	0.74	-1.7
3,233,876	-		Sama_2702	0.74	+0.6
3,233,876	-		Sama_2702	0.74	-1.0
3,234,027	+		Sama_2702	0.88	+0.6
3,234,027	+		Sama_2702	0.88	-1.8
3,234,027	+		Sama_2702	0.88	+1.7
3,234,027	+		Sama_2702	0.88	-0.8
3,234,027	+		Sama_2702	0.88	+2.0
3,234,028	-		Sama_2702	0.88	-0.0
3,234,028	-		Sama_2702	0.88	-0.2
3,234,028	-		Sama_2702	0.88	-1.8
3,234,046	+		Sama_2702	0.89	-0.0
3,234,046	+		Sama_2702	0.89	+0.2
3,234,046	+		Sama_2702	0.89	-0.8
3,234,047	-		Sama_2702	0.89	+0.6
3,234,113	-				+0.8
3,234,138	-				+1.4
3,234,138	-				-0.8
3,234,148	+				+1.0
3,234,148	+				+0.2
3,234,148	+				+4.0
3,234,148	+				+0.1
3,234,148	+				-0.3
3,234,148	+				+0.2
3,234,166	+				-0.3
3,234,166	+				+0.5
3,234,167	-				-1.8
3,234,167	-				+0.9
3,234,174	-				+0.2
3,234,213	-				-0.0
3,234,272	-				-2.3
3,234,295	+				+0.1
3,234,401	-		Sama_2703	0.17	-1.2
3,234,401	-		Sama_2703	0.17	-0.8
3,234,413	+		Sama_2703	0.19	-0.2
3,234,455	+		Sama_2703	0.24	+2.0
3,234,456	-		Sama_2703	0.24	-0.3
3,234,456	-		Sama_2703	0.24	-0.6
3,234,478	-		Sama_2703	0.26	-0.3
3,234,575	+		Sama_2703	0.38	+0.4
3,234,575	+		Sama_2703	0.38	-1.9
3,234,575	+		Sama_2703	0.38	-0.0
3,234,576	-		Sama_2703	0.38	-2.1
3,234,597	-		Sama_2703	0.40	-1.0
3,234,717	-		Sama_2703	0.54	-0.9
3,234,782	+		Sama_2703	0.62	-1.0
3,234,783	-		Sama_2703	0.62	-0.8
3,234,839	+		Sama_2703	0.68	+0.4
3,234,839	+		Sama_2703	0.68	-2.0
3,234,840	-		Sama_2703	0.68	-0.3
3,234,840	-		Sama_2703	0.68	+0.2
3,234,889	+		Sama_2703	0.74	-0.1
3,234,932	-		Sama_2703	0.79	+0.4
3,234,932	-		Sama_2703	0.79	-0.0
3,234,932	-		Sama_2703	0.79	-1.6
3,234,932	-		Sama_2703	0.79	+0.1
3,235,021	-		Sama_2703	0.89	-0.9
3,235,115	+				+1.1
3,235,116	-				+0.8
3,235,116	-				+0.4
3,235,116	-				-0.5
3,235,130	+				-1.2
3,235,131	-				+0.9
3,235,144	+				-0.8
3,235,144	+				-1.0
3,235,145	-				+0.7
3,235,145	-				-0.6
3,235,145	-				-0.0
3,235,145	-				+1.7
3,235,157	+				-0.0
3,235,157	+				-0.2
3,235,157	+				-1.8
3,235,157	+				-0.7
3,235,158	-				-1.0
3,235,158	-				-1.6
3,235,158	-				-1.8
3,235,158	-				+1.2
3,235,158	-				-0.3
3,235,158	-				-0.0
3,235,240	+				-1.2
3,235,240	+				-0.8
3,235,241	-				-1.0
3,235,241	-				+2.6
3,235,319	+				-0.3
3,235,319	+				+1.2
3,235,320	-				+0.4
3,235,320	-				-0.6
3,235,340	+				-0.8
3,235,340	+				-1.0
3,235,340	+				-0.0
3,235,340	+				-0.0
3,235,340	+				+0.1
3,235,341	-				-1.0
3,235,426	-				+0.1
3,235,426	-				+1.0
3,235,426	-				+1.0
3,235,426	-				+1.5
3,235,426	-				+1.1
3,235,426	-				+0.7
3,235,446	+		Sama_2704	0.10	-0.8
3,235,446	+		Sama_2704	0.10	-1.8
3,235,447	-		Sama_2704	0.10	+1.2
3,235,449	+		Sama_2704	0.10	+2.0
3,235,463	+		Sama_2704	0.12	+0.1
3,235,464	-		Sama_2704	0.12	+3.3
3,235,464	-		Sama_2704	0.12	-0.2
3,235,469	+		Sama_2704	0.12	-1.0
3,235,478	+		Sama_2704	0.13	-0.6
3,235,478	+		Sama_2704	0.13	-0.5
3,235,478	+		Sama_2704	0.13	-1.2
3,235,478	+		Sama_2704	0.13	-0.3
3,235,479	-		Sama_2704	0.13	+0.6
3,235,509	-		Sama_2704	0.16	-0.6
3,235,509	-		Sama_2704	0.16	-0.3
3,235,509	-		Sama_2704	0.16	-0.3
3,235,541	+		Sama_2704	0.18	+0.0
3,235,541	+		Sama_2704	0.18	+1.5
3,235,550	+		Sama_2704	0.19	-1.5
3,235,550	+		Sama_2704	0.19	+0.1
3,235,551	-		Sama_2704	0.19	+1.7
3,235,551	-		Sama_2704	0.19	-0.0
3,235,633	+		Sama_2704	0.26	+1.0
3,235,633	+		Sama_2704	0.26	-0.2
3,235,633	+		Sama_2704	0.26	+0.2
3,235,634	-		Sama_2704	0.26	-0.1
3,235,634	-		Sama_2704	0.26	-0.4
3,235,741	+		Sama_2704	0.36	-0.6
3,235,747	+		Sama_2704	0.36	-2.1
3,235,775	+		Sama_2704	0.39	-0.0
3,235,775	+		Sama_2704	0.39	-0.8
3,235,775	+		Sama_2704	0.39	-2.7
3,235,775	+		Sama_2704	0.39	-0.5
3,235,776	-		Sama_2704	0.39	-2.6
3,235,777	+		Sama_2704	0.39	-0.8
3,235,778	-		Sama_2704	0.39	-1.6
3,235,778	-		Sama_2704	0.39	-0.0
3,235,865	+		Sama_2704	0.46	+0.2
3,235,874	+		Sama_2704	0.47	+0.5
3,235,874	+		Sama_2704	0.47	-0.6
3,235,875	-		Sama_2704	0.47	-1.5
3,235,883	-		Sama_2704	0.48	-1.2
3,235,914	+		Sama_2704	0.50	+0.3
3,235,914	+		Sama_2704	0.50	-1.0
3,235,914	+		Sama_2704	0.50	+2.0
3,235,915	-		Sama_2704	0.51	+0.1
3,235,915	-		Sama_2704	0.51	-0.8