Strain Fitness in Shewanella amazonensis SB2B around Sama_2688

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
3,216,657	+		Sama_2687	0.46	-0.6
3,216,658	-		Sama_2687	0.46	-0.4
3,216,699	+		Sama_2687	0.49	-0.2
3,216,745	+		Sama_2687	0.51	-0.8
3,216,745	+		Sama_2687	0.51	+1.0
3,216,745	+		Sama_2687	0.51	-1.0
3,216,745	+		Sama_2687	0.51	-0.5
3,216,745	+		Sama_2687	0.51	-0.4
3,216,746	-		Sama_2687	0.51	-0.3
3,216,824	-		Sama_2687	0.56	+0.2
3,216,844	+		Sama_2687	0.58	-0.1
3,216,845	-		Sama_2687	0.58	+1.1
3,216,899	+		Sama_2687	0.61	-1.1
3,216,899	+		Sama_2687	0.61	-1.6
3,216,899	+		Sama_2687	0.61	-0.9
3,216,903	+		Sama_2687	0.61	-0.2
3,216,903	+		Sama_2687	0.61	-1.3
3,216,903	+		Sama_2687	0.61	-0.7
3,216,903	+		Sama_2687	0.61	-1.9
3,216,904	-		Sama_2687	0.61	-1.1
3,216,904	-		Sama_2687	0.61	-0.0
3,216,904	-		Sama_2687	0.61	-0.0
3,216,904	-		Sama_2687	0.61	+0.4
3,216,904	-		Sama_2687	0.61	-1.0
3,216,904	-		Sama_2687	0.61	-0.7
3,217,006	+		Sama_2687	0.68	-0.5
3,217,007	-		Sama_2687	0.68	-0.8
3,217,007	-		Sama_2687	0.68	-0.8
3,217,102	+		Sama_2687	0.74	-1.3
3,217,102	+		Sama_2687	0.74	-0.3
3,217,102	+		Sama_2687	0.74	+0.1
3,217,103	-		Sama_2687	0.74	-0.9
3,217,103	-		Sama_2687	0.74	-1.0
3,217,103	-		Sama_2687	0.74	-0.8
3,217,103	-		Sama_2687	0.74	-0.8
3,217,103	-		Sama_2687	0.74	+1.4
3,217,103	-		Sama_2687	0.74	+0.6
3,217,126	+		Sama_2687	0.75	-2.0
3,217,127	-		Sama_2687	0.75	+0.4
3,217,127	-		Sama_2687	0.75	-0.3
3,217,318	+		Sama_2687	0.87	+0.6
3,217,319	-		Sama_2687	0.87	+1.0
3,217,319	-		Sama_2687	0.87	-0.1
3,217,342	+		Sama_2687	0.89	-0.6
3,217,490	-				-1.7
3,217,490	-				+0.1
3,217,520	+				-0.4
3,217,543	-				-1.3
3,217,572	-				+1.0
3,217,606	+				+0.6
3,217,632	+				+0.1
3,217,632	+				+0.4
3,217,632	+				-2.1
3,217,633	-				-2.0
3,217,633	-				-0.8
3,217,633	-				+0.5
3,217,633	-				-0.5
3,217,633	-				-1.3
3,217,633	-				-0.5
3,217,682	+		Sama_2688	0.14	-0.0
3,217,682	+		Sama_2688	0.14	-0.3
3,217,682	+		Sama_2688	0.14	-1.5
3,217,682	+		Sama_2688	0.14	-0.8
3,217,682	+		Sama_2688	0.14	+1.0
3,217,682	+		Sama_2688	0.14	-2.2
3,217,682	+		Sama_2688	0.14	-0.3
3,217,683	-		Sama_2688	0.14	-0.9
3,217,683	-		Sama_2688	0.14	-0.3
3,217,748	+		Sama_2688	0.25	-0.6
3,217,804	-		Sama_2688	0.35	-1.2
3,217,804	-		Sama_2688	0.35	-0.0
3,217,804	-		Sama_2688	0.35	-0.5
3,217,897	+		Sama_2688	0.51	+0.1
3,217,898	-		Sama_2688	0.52	-0.3
3,218,062	+		Sama_2688	0.81	-0.9
3,218,062	+		Sama_2688	0.81	-1.0
3,218,063	-		Sama_2688	0.81	-1.7
3,218,063	-		Sama_2688	0.81	-0.8
3,218,063	-		Sama_2688	0.81	-0.2
3,218,063	-		Sama_2688	0.81	-1.0
3,218,067	-		Sama_2688	0.81	+0.8
3,218,171	+				+0.6
3,218,172	-				+1.2
3,218,172	-				+1.2
3,218,172	-				-0.6
3,218,183	+				-0.0
3,218,328	+		Sama_2689	0.20	-0.3
3,218,329	-		Sama_2689	0.20	+2.0
3,218,397	+		Sama_2689	0.29	-0.5
3,218,399	+		Sama_2689	0.29	+0.4
3,218,399	+		Sama_2689	0.29	-2.4
3,218,399	+		Sama_2689	0.29	-0.4
3,218,399	+		Sama_2689	0.29	-0.3
3,218,399	+		Sama_2689	0.29	-0.1
3,218,399	+		Sama_2689	0.29	-1.0
3,218,400	-		Sama_2689	0.29	-0.4
3,218,400	-		Sama_2689	0.29	-0.3
3,218,400	-		Sama_2689	0.29	-0.3
3,218,400	-		Sama_2689	0.29	-0.4
3,218,400	-		Sama_2689	0.29	+0.4
3,218,454	+		Sama_2689	0.36	+0.2
3,218,454	+		Sama_2689	0.36	+0.1
3,218,454	+		Sama_2689	0.36	-0.9
3,218,455	-		Sama_2689	0.37	-0.2
3,218,455	-		Sama_2689	0.37	-0.6
3,218,577	+		Sama_2689	0.53	-1.3
3,218,578	-		Sama_2689	0.53	+0.4
3,218,675	+		Sama_2689	0.66	-1.3
3,218,675	+		Sama_2689	0.66	-0.4
3,218,675	+		Sama_2689	0.66	-0.4
3,218,676	-		Sama_2689	0.66	-0.8
3,218,797	+		Sama_2689	0.82	-0.8
3,218,797	+		Sama_2689	0.82	-0.7
3,218,797	+		Sama_2689	0.82	-0.6
3,218,797	+		Sama_2689	0.82	+0.7
3,218,798	-		Sama_2689	0.82	+2.0
3,218,798	-		Sama_2689	0.82	+0.4
3,218,798	-		Sama_2689	0.82	-1.2
3,218,798	-		Sama_2689	0.82	-1.4
3,218,798	-		Sama_2689	0.82	+0.2
3,218,798	-		Sama_2689	0.82	+0.3
3,218,798	-		Sama_2689	0.82	-0.8
3,218,798	-		Sama_2689	0.82	+0.5
3,218,798	-		Sama_2689	0.82	+0.6
3,218,798	-		Sama_2689	0.82	-1.5
3,218,815	+		Sama_2689	0.85	-1.0
3,218,815	+		Sama_2689	0.85	-1.2
3,218,816	-		Sama_2689	0.85	-0.3
3,218,823	+		Sama_2689	0.86	+1.0
3,218,928	+				+0.2
3,218,928	+				+1.0
3,218,929	-				-0.8