Strain Fitness in Shewanella amazonensis SB2B around Sama_2439

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
2,933,131	+				-1.2
2,933,132	-				-0.6
2,933,152	+				-0.7
2,933,152	+				+0.7
2,933,152	+				+0.3
2,933,152	+				-0.4
2,933,214	+				+0.2
2,933,306	-				+0.1
2,933,324	-				+0.1
2,933,346	+				-0.7
2,933,356	+				+0.4
2,933,376	-				+0.9
2,933,379	+				-0.7
2,933,379	+				-2.7
2,933,399	+				+0.3
2,933,399	+				+0.1
2,933,399	+				+0.7
2,933,400	-				+1.2
2,933,400	-				+0.2
2,933,402	+				-0.4
2,933,402	+				+0.3
2,933,403	-				-2.5
2,933,406	+				-0.2
2,933,407	-				+0.2
2,933,491	-				-0.6
2,933,491	-				-0.2
2,933,505	+				-0.7
2,933,505	+				+0.7
2,933,506	-				+0.1
2,933,511	+				+0.2
2,933,512	-				-1.4
2,933,524	+				-2.0
2,933,524	+				+1.5
2,933,524	+				+0.9
2,933,525	-				-1.1
2,933,555	-				-0.7
2,933,558	+				-1.5
2,933,558	+				+0.9
2,933,586	+				+0.3
2,933,586	+				+0.7
2,933,586	+				-0.7
2,933,587	-				+0.9
2,933,695	+				+0.2
2,933,696	-				-1.5
2,933,696	-				-0.9
2,933,911	+		Sama_2439	0.16	-0.4
2,933,930	-		Sama_2439	0.17	+0.1
2,933,930	-		Sama_2439	0.17	+1.2
2,933,935	+		Sama_2439	0.17	+0.9
2,933,936	-		Sama_2439	0.18	+0.0
2,933,992	+		Sama_2439	0.21	-0.1
2,934,048	+		Sama_2439	0.24	-1.6
2,934,227	+		Sama_2439	0.35	-1.1
2,934,227	+		Sama_2439	0.35	-1.0
2,934,228	-		Sama_2439	0.35	-0.1
2,934,228	-		Sama_2439	0.35	-0.0
2,934,236	+		Sama_2439	0.36	-1.7
2,934,238	+		Sama_2439	0.36	-0.9
2,934,239	-		Sama_2439	0.36	-0.4
2,934,256	+		Sama_2439	0.37	-3.1
2,934,269	-		Sama_2439	0.38	+0.4
2,934,271	+		Sama_2439	0.38	-0.7
2,934,271	+		Sama_2439	0.38	-0.1
2,934,329	-		Sama_2439	0.41	-2.7
2,934,329	-		Sama_2439	0.41	-1.6
2,934,391	+		Sama_2439	0.45	+1.5
2,934,392	-		Sama_2439	0.45	-0.8
2,934,558	+		Sama_2439	0.55	+0.5
2,934,559	-		Sama_2439	0.55	+0.4
2,934,573	+		Sama_2439	0.56	-0.7
2,934,573	+		Sama_2439	0.56	-1.4
2,934,605	+		Sama_2439	0.58	-0.9
2,934,605	+		Sama_2439	0.58	-0.7
2,934,606	-		Sama_2439	0.58	-0.4
2,934,606	-		Sama_2439	0.58	+0.3
2,934,606	-		Sama_2439	0.58	-0.4
2,934,645	+		Sama_2439	0.61	+0.3
2,934,676	+		Sama_2439	0.63	+0.2
2,934,677	-		Sama_2439	0.63	-1.8
2,934,735	-		Sama_2439	0.66	+0.6
2,934,735	-		Sama_2439	0.66	-0.8
2,935,004	-		Sama_2439	0.82	-0.4
2,935,067	+		Sama_2439	0.86	-1.5
2,935,251	+				-1.2
2,935,251	+				+0.9
2,935,252	-				-0.5
2,935,252	-				-0.7
2,935,252	-				-1.9
2,935,266	+				-0.8
2,935,266	+				-0.7
2,935,267	-				-2.3
2,935,267	-				-1.1
2,935,290	-				-0.4
2,935,290	-				-1.2
2,935,306	+				+0.5
2,935,368	+				+0.7
2,935,369	-				+0.5
2,935,369	-				+0.3
2,935,369	-				-2.3
2,935,369	-				+0.1
2,935,380	+				-1.6
2,935,380	+				-0.7
2,935,380	+				-0.1
2,935,380	+				+0.1
2,935,380	+				+0.0
2,935,380	+				-0.1
2,935,380	+				-0.4
2,935,380	+				+0.3
2,935,380	+				-1.9
2,935,380	+				-0.4
2,935,380	+				+0.3
2,935,380	+				+2.3
2,935,380	+				-1.1
2,935,380	+				-0.7
2,935,381	-				-0.2
2,935,381	-				-0.2
2,935,381	-				+1.2
2,935,381	-				-0.6
2,935,381	-				-0.4
2,935,381	-				-0.1
2,935,381	-				+0.5
2,935,381	-				-0.6
2,935,381	-				-1.2
2,935,381	-				-1.1
2,935,381	-				+0.9
2,935,489	+				+0.5
2,935,490	-				-2.2
2,935,511	+				+0.6
2,935,511	+				+0.1
2,935,542	-				+0.3
2,935,802	+		Sama_2440	0.15	-0.1
2,935,802	+		Sama_2440	0.15	-0.1
2,935,802	+		Sama_2440	0.15	-0.9
2,935,802	+		Sama_2440	0.15	+0.6
2,935,802	+		Sama_2440	0.15	-0.5
2,935,802	+		Sama_2440	0.15	-0.2
2,935,803	-		Sama_2440	0.15	-0.7
2,935,803	-		Sama_2440	0.15	+0.7
2,935,803	-		Sama_2440	0.15	-2.0
2,935,803	-		Sama_2440	0.15	+0.9
2,935,862	-		Sama_2440	0.17	-0.7
2,936,047	-		Sama_2440	0.24	-1.2
2,936,062	+		Sama_2440	0.24	-0.1
2,936,062	+		Sama_2440	0.24	-0.1
2,936,136	+		Sama_2440	0.27	+0.0
2,936,136	+		Sama_2440	0.27	-1.5
2,936,164	+		Sama_2440	0.28	-0.1
2,936,164	+		Sama_2440	0.28	-0.7
2,936,165	-		Sama_2440	0.28	-0.4
2,936,165	-		Sama_2440	0.28	-1.1
2,936,190	+		Sama_2440	0.29	-0.4