Strain Fitness in Shewanella amazonensis SB2B around Sama_2357

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
2,831,178	-		Sama_2355	0.89	+1.1
2,831,181	+		Sama_2355	0.89	-1.2
2,831,181	+		Sama_2355	0.89	-1.2
2,831,181	+		Sama_2355	0.89	-0.9
2,831,182	-		Sama_2355	0.89	-0.7
2,831,182	-		Sama_2355	0.89	-1.3
2,831,228	-				+0.9
2,831,235	+				+0.3
2,831,235	+				-1.6
2,831,235	+				-1.2
2,831,236	-				+0.7
2,831,236	-				-1.0
2,831,236	-				-1.0
2,831,236	-				+0.8
2,831,236	-				-0.7
2,831,236	-				+0.5
2,831,236	-				-0.2
2,831,236	-				+0.4
2,831,236	-				-1.6
2,831,236	-				-0.5
2,831,325	-				-1.5
2,831,339	+				+1.0
2,831,352	+				-1.3
2,831,352	+				-2.5
2,831,352	+				+0.7
2,831,353	-				-1.7
2,831,353	-				-1.7
2,831,372	+				-0.2
2,831,372	+				+0.4
2,831,372	+				-1.3
2,831,372	+				+0.3
2,831,373	-				-0.2
2,831,373	-				+0.0
2,831,373	-				+0.3
2,831,373	-				+0.1
2,831,373	-				-0.1
2,831,373	-				-2.1
2,831,384	+				+0.8
2,831,418	-				-0.3
2,831,418	-				-0.2
2,831,441	+				-0.5
2,831,441	+				-0.3
2,831,442	-				+1.8
2,831,442	-				-1.5
2,831,442	-				-0.2
2,831,447	+				-1.0
2,831,447	+				-1.1
2,831,447	+				+0.3
2,831,447	+				-1.7
2,831,447	+				+0.3
2,831,447	+				-2.1
2,831,447	+				+0.5
2,831,448	-				-1.3
2,831,448	-				+0.8
2,831,448	-				-1.0
2,831,451	+				+0.5
2,831,451	+				-1.4
2,831,451	+				-0.1
2,831,451	+				+0.1
2,831,451	+				-0.1
2,831,451	+				+0.8
2,831,451	+				-0.4
2,831,452	-				-0.5
2,831,452	-				-1.1
2,831,452	-				+1.0
2,831,582	+				+1.3
2,831,583	-				-0.8
2,831,598	+		Sama_2356	0.11	-0.9
2,831,599	-		Sama_2356	0.12	-1.2
2,831,599	-		Sama_2356	0.12	-1.3
2,831,599	-		Sama_2356	0.12	-1.7
2,831,604	+		Sama_2356	0.13	-0.2
2,831,664	+		Sama_2356	0.25	+1.0
2,831,664	+		Sama_2356	0.25	-0.5
2,831,665	-		Sama_2356	0.25	+0.0
2,831,665	-		Sama_2356	0.25	-0.9
2,831,683	+		Sama_2356	0.28	+2.1
2,831,684	-		Sama_2356	0.29	+1.1
2,831,699	+		Sama_2356	0.32	-1.3
2,831,699	+		Sama_2356	0.32	+0.0
2,831,699	+		Sama_2356	0.32	+0.3
2,831,699	+		Sama_2356	0.32	+0.4
2,831,699	+		Sama_2356	0.32	-1.0
2,831,700	-		Sama_2356	0.32	+0.7
2,831,700	-		Sama_2356	0.32	-0.2
2,831,741	-		Sama_2356	0.40	+0.1
2,831,858	-		Sama_2356	0.64	+0.6
2,831,871	+		Sama_2356	0.66	+1.8
2,831,871	+		Sama_2356	0.66	+2.3
2,831,914	-		Sama_2356	0.75	-3.8
2,831,914	-		Sama_2356	0.75	-0.3
2,831,914	-		Sama_2356	0.75	-0.4
2,831,928	+		Sama_2356	0.78	+1.8
2,831,928	+		Sama_2356	0.78	+2.4
2,831,928	+		Sama_2356	0.78	+0.8
2,831,929	-		Sama_2356	0.78	+1.3
2,831,929	-		Sama_2356	0.78	-0.3
2,831,996	-				+0.8
2,831,996	-				-0.9
2,831,996	-				+0.0
2,832,004	+				-0.5
2,832,005	-				-0.9
2,832,005	-				+1.0
2,832,029	-				-0.3
2,832,037	+				+1.2
2,832,060	+				+1.6
2,832,060	+				-1.7
2,832,060	+				-0.1
2,832,061	-				-0.6
2,832,083	+				+0.7
2,832,086	+				+0.6
2,832,086	+				+0.3
2,832,087	-				+1.1
2,832,093	+				-0.1
2,832,106	-				+0.9
2,832,156	+				-1.0
2,832,156	+				+0.3
2,832,157	-				+0.3
2,832,233	+		Sama_2357	0.19	-1.1
2,832,233	+		Sama_2357	0.19	+0.8
2,832,335	+		Sama_2357	0.54	-0.9
2,832,411	+		Sama_2357	0.80	-0.7
2,832,411	+		Sama_2357	0.80	-1.8
2,832,411	+		Sama_2357	0.80	+0.5
2,832,411	+		Sama_2357	0.80	-1.8
2,832,411	+		Sama_2357	0.80	-0.7
2,832,412	-		Sama_2357	0.80	-0.4
2,832,427	+		Sama_2357	0.86	-0.1
2,832,454	-				+0.0
2,832,454	-				-1.1
2,832,466	+				+1.9
2,832,466	+				+0.0
2,832,467	-				-1.5
2,832,478	-				-0.4
2,832,532	+				+0.3
2,832,532	+				+0.4
2,832,533	-				-0.1
2,832,533	-				+1.7