Strain Fitness in Shewanella amazonensis SB2B around Sama_1969

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
2,396,401	+		Sama_1967	0.89	-0.6
2,396,402	-		Sama_1967	0.89	-0.5
2,396,402	-		Sama_1967	0.89	+0.2
2,396,458	+				+0.5
2,396,458	+				+0.4
2,396,458	+				-1.9
2,396,458	+				-2.3
2,396,459	-				-1.6
2,396,469	+				-0.6
2,396,470	-				-1.0
2,396,490	+				-0.5
2,396,491	-				+0.4
2,396,491	-				+0.0
2,396,491	-				-0.4
2,396,527	-				-0.8
2,396,527	-				+1.2
2,396,562	+				+0.4
2,396,563	-				-1.2
2,396,608	+		Sama_1968	0.14	-0.6
2,396,609	-		Sama_1968	0.14	-0.2
2,396,609	-		Sama_1968	0.14	-0.6
2,396,628	+		Sama_1968	0.16	-0.4
2,396,629	-		Sama_1968	0.16	-1.5
2,396,629	-		Sama_1968	0.16	+1.8
2,396,629	-		Sama_1968	0.16	+1.2
2,396,629	-		Sama_1968	0.16	-1.0
2,396,629	-		Sama_1968	0.16	-0.3
2,396,629	-		Sama_1968	0.16	+0.7
2,396,636	-		Sama_1968	0.17	+0.8
2,396,636	-		Sama_1968	0.17	+0.8
2,396,638	+		Sama_1968	0.17	-0.8
2,396,639	-		Sama_1968	0.17	+1.8
2,396,649	+		Sama_1968	0.18	+1.2
2,396,662	+		Sama_1968	0.20	+0.3
2,396,662	+		Sama_1968	0.20	-1.8
2,396,662	+		Sama_1968	0.20	-0.3
2,396,663	-		Sama_1968	0.20	+1.2
2,396,663	-		Sama_1968	0.20	-0.6
2,396,663	-		Sama_1968	0.20	-0.2
2,396,665	-		Sama_1968	0.20	+1.2
2,396,779	+		Sama_1968	0.34	+0.4
2,396,799	+		Sama_1968	0.36	-0.2
2,396,799	+		Sama_1968	0.36	+0.8
2,396,841	+		Sama_1968	0.41	+0.9
2,396,841	+		Sama_1968	0.41	+0.6
2,396,912	+		Sama_1968	0.50	-1.0
2,396,912	+		Sama_1968	0.50	-0.6
2,396,913	-		Sama_1968	0.50	-0.2
2,396,916	-		Sama_1968	0.50	-0.6
2,396,929	+		Sama_1968	0.52	+1.4
2,396,929	+		Sama_1968	0.52	-0.8
2,396,929	+		Sama_1968	0.52	-0.1
2,396,929	+		Sama_1968	0.52	-0.0
2,396,929	+		Sama_1968	0.52	-0.7
2,396,929	+		Sama_1968	0.52	-0.0
2,396,929	+		Sama_1968	0.52	+0.8
2,396,929	+		Sama_1968	0.52	+1.0
2,396,930	-		Sama_1968	0.52	-0.8
2,396,930	-		Sama_1968	0.52	-0.2
2,396,930	-		Sama_1968	0.52	+0.2
2,396,932	-		Sama_1968	0.52	+2.2
2,396,932	-		Sama_1968	0.52	+0.5
2,397,044	+		Sama_1968	0.65	+2.1
2,397,052	+		Sama_1968	0.66	+0.4
2,397,052	+		Sama_1968	0.66	-0.4
2,397,052	+		Sama_1968	0.66	-0.8
2,397,056	+		Sama_1968	0.67	+0.9
2,397,056	+		Sama_1968	0.67	-0.7
2,397,057	-		Sama_1968	0.67	+0.5
2,397,110	+		Sama_1968	0.73	-0.2
2,397,110	+		Sama_1968	0.73	+0.3
2,397,110	+		Sama_1968	0.73	-1.3
2,397,164	-		Sama_1968	0.80	+0.8
2,397,166	+		Sama_1968	0.80	-1.6
2,397,166	+		Sama_1968	0.80	-1.2
2,397,166	+		Sama_1968	0.80	-0.8
2,397,166	+		Sama_1968	0.80	-0.4
2,397,166	+		Sama_1968	0.80	+0.9
2,397,170	+		Sama_1968	0.80	-2.6
2,397,171	-		Sama_1968	0.81	+0.6
2,397,231	+		Sama_1968	0.88	-0.0
2,397,273	-				+0.5
2,397,310	+				-1.7
2,397,310	+				-0.9
2,397,310	+				-0.6
2,397,310	+				-0.6
2,397,310	+				-0.0
2,397,310	+				-0.2
2,397,311	-				+0.8
2,397,311	-				-0.3
2,397,311	-				+0.4
2,397,311	-				+0.7
2,397,311	-				-0.6
2,397,312	+				-0.4
2,397,312	+				-0.7
2,397,312	+				+0.2
2,397,313	-				-1.0
2,397,340	+				-0.3
2,397,340	+				+0.2
2,397,340	+				-0.2
2,397,341	-				-0.6
2,397,341	-				-1.0
2,397,341	-				+0.0
2,397,394	+				+0.2
2,397,394	+				+0.3
2,397,394	+				+0.8
2,397,395	-				-0.2
2,397,441	-		Sama_1969	0.12	-1.0
2,397,452	+		Sama_1969	0.13	-2.0
2,397,485	+		Sama_1969	0.17	-0.3
2,397,485	+		Sama_1969	0.17	+1.2
2,397,486	-		Sama_1969	0.17	-0.6
2,397,486	-		Sama_1969	0.17	-1.6
2,397,817	+		Sama_1969	0.54	-0.1
2,397,818	-		Sama_1969	0.54	-1.7
2,398,019	+		Sama_1969	0.76	-0.5
2,398,019	+		Sama_1969	0.76	+0.4
2,398,019	+		Sama_1969	0.76	-0.2
2,398,135	-		Sama_1969	0.89	-0.0
2,398,162	+				+0.8
2,398,162	+				+0.1
2,398,285	-				+1.2
2,398,340	-				-0.8
2,398,340	-				+0.4
2,398,340	-				-1.2
2,398,340	-				-1.6
2,398,340	-				+1.2
2,398,340	-				+0.4
2,398,340	-				-0.2
2,398,340	-				-0.6
2,398,340	-				+0.2
2,398,341	+				-0.2
2,398,341	+				+0.8
2,398,341	+				+0.4
2,398,341	+				-0.7
2,398,342	-				-1.0
2,398,342	-				-0.2
2,398,342	-				-0.0
2,398,342	-				+0.8
2,398,342	-				+1.2
2,398,342	-				-0.6
2,398,342	-				-0.5
2,398,342	-				+1.3
2,398,342	-				-0.1
2,398,342	-				+0.8
2,398,393	+				-1.0
2,398,394	-				-0.9
2,398,394	-				+0.4
2,398,399	+				-0.8
2,398,400	-				+0.5
2,398,441	+				+0.4
2,398,451	+				+1.2
2,398,461	+				-1.1
2,398,461	+				-1.8
2,398,461	+				-0.8
2,398,461	+				-1.0
2,398,462	-				-0.0
2,398,462	-				-1.0
2,398,462	-				+0.2
2,398,462	-				+0.4
2,398,462	-				+1.2
2,398,462	-				-0.4
2,398,474	+				-0.3
2,398,542	+				+0.8
2,398,543	-				-0.8
2,398,626	-				+0.2
2,398,626	-				-0.6
2,398,698	-				+0.4
2,398,698	-				-2.2
2,398,700	-				-0.6
2,398,726	-				+1.2
2,398,902	-		Sama_1970	0.89	-1.0
2,398,906	-				-0.6
2,398,926	-				+1.8
2,398,926	-				-0.2
2,398,926	-				+0.8
2,398,945	-				+1.2
2,399,008	-				-1.4
2,399,085	-				-1.4
2,399,104	+				-0.6
2,399,127	-				+0.5
2,399,127	-				+1.8
2,399,127	-				-0.9
2,399,158	-				-0.2
2,399,161	+				-0.6
2,399,161	+				-1.7
2,399,197	-				+0.5
2,399,202	-				-0.4