Strain Fitness in Shewanella amazonensis SB2B around Sama_1949

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
2,375,297	-		Sama_1947	0.71	+0.7
2,375,307	+		Sama_1947	0.72	-0.2
2,375,312	+		Sama_1947	0.73	-1.2
2,375,326	+		Sama_1947	0.74	-0.1
2,375,326	+		Sama_1947	0.74	-1.4
2,375,465	+				-0.4
2,375,523	+				-0.3
2,375,611	+		Sama_1948	0.13	-0.1
2,375,611	+		Sama_1948	0.13	-1.6
2,375,637	+		Sama_1948	0.17	-0.3
2,375,637	+		Sama_1948	0.17	-1.1
2,375,637	+		Sama_1948	0.17	-0.1
2,375,639	+		Sama_1948	0.17	+0.4
2,375,639	+		Sama_1948	0.17	+0.7
2,375,639	+		Sama_1948	0.17	-0.3
2,375,639	+		Sama_1948	0.17	-0.8
2,375,747	+		Sama_1948	0.34	-0.1
2,375,867	+		Sama_1948	0.53	-2.1
2,375,867	+		Sama_1948	0.53	+0.7
2,375,867	+		Sama_1948	0.53	-2.1
2,375,887	+		Sama_1948	0.57	+1.6
2,375,888	-		Sama_1948	0.57	+0.7
2,375,937	+		Sama_1948	0.65	-0.6
2,375,938	-		Sama_1948	0.65	-0.8
2,375,939	+		Sama_1948	0.65	-0.1
2,375,939	+		Sama_1948	0.65	-1.1
2,376,033	-		Sama_1948	0.80	+0.6
2,376,047	-		Sama_1948	0.82	+0.9
2,376,082	+		Sama_1948	0.88	-0.7
2,376,132	+				+1.7
2,376,134	+				+0.4
2,376,135	-				+0.6
2,376,156	+				-0.3
2,376,157	-				-1.3
2,376,157	-				-0.1
2,376,180	-				-0.2
2,376,225	+				-0.6
2,376,225	+				+0.2
2,376,226	-				+1.2
2,376,257	+				+0.9
2,376,326	+				-1.2
2,376,326	+				+0.4
2,376,326	+				+0.2
2,376,326	+				-1.1
2,376,326	+				-0.6
2,376,326	+				-0.9
2,376,327	-				-1.1
2,376,327	-				-0.1
2,376,327	-				+1.0
2,376,327	-				-0.2
2,376,327	-				-1.6
2,376,327	-				-1.1
2,376,327	-				-0.2
2,376,327	-				-1.1
2,376,327	-				-1.2
2,376,327	-				-1.2
2,376,327	-				+0.3
2,376,348	+				-0.6
2,376,392	+		Sama_1949	0.12	-1.4
2,376,435	-		Sama_1949	0.16	-0.7
2,376,468	+		Sama_1949	0.20	-0.7
2,376,534	+		Sama_1949	0.26	-2.2
2,376,537	-		Sama_1949	0.27	-0.9
2,376,572	+		Sama_1949	0.30	+1.4
2,376,830	-		Sama_1949	0.56	-1.9
2,376,866	+		Sama_1949	0.60	+0.8
2,376,867	-		Sama_1949	0.60	-1.2
2,376,897	-		Sama_1949	0.63	-0.4
2,376,932	+		Sama_1949	0.67	-2.5
2,377,113	+		Sama_1949	0.85	-0.1
2,377,195	-				-0.2
2,377,195	-				-0.2
2,377,277	-				+0.3
2,377,290	+				+0.6
2,377,290	+				-0.9
2,377,291	-				-1.2
2,377,291	-				-0.1
2,377,291	-				+0.0
2,377,291	-				+0.8
2,377,291	-				+0.8
2,377,291	-				-0.8
2,377,292	+				-0.4
2,377,324	-				+0.6
2,377,376	-				-0.6
2,377,378	-				-0.2
2,377,611	-		Sama_1950	0.32	+0.2
2,377,710	+		Sama_1950	0.43	+0.2
2,377,768	+		Sama_1950	0.49	-0.6
2,377,832	+		Sama_1950	0.56	-1.1
2,377,842	-		Sama_1950	0.57	-1.2
2,378,051	-		Sama_1950	0.79	-1.1
2,378,254	-				+0.8