Strain Fitness in Shewanella amazonensis SB2B around Sama_1785

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
2,176,439	+		Sama_1784	0.46	-0.0
2,176,439	+		Sama_1784	0.46	-1.3
2,176,563	+		Sama_1784	0.55	-0.5
2,176,593	-		Sama_1784	0.58	+0.4
2,176,613	+		Sama_1784	0.59	-0.8
2,176,613	+		Sama_1784	0.59	-2.4
2,176,668	-		Sama_1784	0.63	-1.3
2,176,784	+		Sama_1784	0.72	+0.1
2,176,995	-		Sama_1784	0.88	-1.4
2,177,018	+				+0.3
2,177,018	+				-1.1
2,177,093	+				-0.0
2,177,174	+				+0.1
2,177,174	+				-0.3
2,177,174	+				-0.9
2,177,193	+				+0.7
2,177,193	+				-0.7
2,177,194	-				-2.1
2,177,195	+				-0.3
2,177,195	+				-1.0
2,177,195	+				+0.4
2,177,195	+				+0.7
2,177,196	-				-0.7
2,177,210	+				-1.0
2,177,210	+				-0.1
2,177,247	+				-1.1
2,177,267	+				+0.7
2,177,268	-				+0.1
2,177,281	-				-1.8
2,177,294	+				+0.1
2,177,294	+				-0.6
2,177,294	+				-0.2
2,177,295	-				+2.7
2,177,309	+				-1.4
2,177,381	+				-0.9
2,177,425	+				-0.4
2,177,426	-				-0.3
2,177,426	-				+1.7
2,177,474	+		Sama_1785	0.20	-1.4
2,177,485	+		Sama_1785	0.23	-1.1
2,177,485	+		Sama_1785	0.23	-1.1
2,177,486	-		Sama_1785	0.23	-0.4
2,177,486	-		Sama_1785	0.23	-0.1
2,177,670	+		Sama_1785	0.68	-0.9
2,177,727	+		Sama_1785	0.82	-0.4
2,177,728	-		Sama_1785	0.83	+1.1
2,177,736	-		Sama_1785	0.85	-1.1
2,177,736	-		Sama_1785	0.85	+0.4
2,177,736	-		Sama_1785	0.85	-1.7
2,177,736	-		Sama_1785	0.85	+0.7
2,177,800	+				+1.1
2,177,820	-				-0.0
2,177,853	+				+0.7
2,177,854	-				+0.3
2,177,862	-				+0.5
2,177,862	-				-0.9
2,177,862	-				+0.4
2,177,871	-				+0.8
2,177,966	+				-1.4
2,177,967	-				-1.4
2,177,967	-				-1.9
2,177,978	+				+0.3
2,177,993	+				-0.6
2,178,120	-		Sama_1786	0.13	+0.3
2,178,122	+		Sama_1786	0.13	+0.4
2,178,123	-		Sama_1786	0.13	-1.6
2,178,142	-		Sama_1786	0.14	-3.1
2,178,146	+		Sama_1786	0.14	-0.9
2,178,147	-		Sama_1786	0.14	+1.1
2,178,147	-		Sama_1786	0.14	+0.9
2,178,147	-		Sama_1786	0.14	-0.2
2,178,164	-		Sama_1786	0.15	+1.3
2,178,199	-		Sama_1786	0.16	-0.1
2,178,199	-		Sama_1786	0.16	-2.4
2,178,211	+		Sama_1786	0.17	+0.5
2,178,212	-		Sama_1786	0.17	-0.6
2,178,224	+		Sama_1786	0.18	+0.5
2,178,225	-		Sama_1786	0.18	-0.3
2,178,225	-		Sama_1786	0.18	-0.0
2,178,385	-		Sama_1786	0.24	-0.3
2,178,385	-		Sama_1786	0.24	-0.0
2,178,470	+		Sama_1786	0.28	-1.9
2,178,471	-		Sama_1786	0.28	+0.7
2,178,474	-		Sama_1786	0.28	+0.1
2,178,483	+		Sama_1786	0.28	+0.4
2,178,543	+		Sama_1786	0.31	+1.7
2,178,577	+		Sama_1786	0.32	+0.3
2,178,578	-		Sama_1786	0.32	+0.6
2,178,578	-		Sama_1786	0.32	+0.4
2,178,578	-		Sama_1786	0.32	-1.1
2,178,584	+		Sama_1786	0.33	+1.7
2,178,584	+		Sama_1786	0.33	-1.1
2,178,585	-		Sama_1786	0.33	-1.1
2,178,629	-		Sama_1786	0.35	+0.1
2,178,643	-		Sama_1786	0.35	-0.7
2,178,707	+		Sama_1786	0.38	+0.3
2,178,708	-		Sama_1786	0.38	-1.6
2,178,708	-		Sama_1786	0.38	-0.3
2,178,730	+		Sama_1786	0.39	+0.3
2,178,731	-		Sama_1786	0.39	-0.9
2,178,770	+		Sama_1786	0.41	-0.1
2,178,777	+		Sama_1786	0.41	-2.8
2,178,778	-		Sama_1786	0.41	+1.7