Strain Fitness in Shewanella amazonensis SB2B around Sama_1776

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
2,170,169	+		Sama_1774	0.55	+0.4
2,170,170	-		Sama_1774	0.55	-0.4
2,170,190	+		Sama_1774	0.56	+1.0
2,170,190	+		Sama_1774	0.56	+0.1
2,170,193	+		Sama_1774	0.56	-0.1
2,170,193	+		Sama_1774	0.56	+1.1
2,170,216	+		Sama_1774	0.58	+0.4
2,170,216	+		Sama_1774	0.58	+0.5
2,170,217	-		Sama_1774	0.58	+2.1
2,170,217	-		Sama_1774	0.58	+0.4
2,170,295	+		Sama_1774	0.64	-0.9
2,170,295	+		Sama_1774	0.64	-0.1
2,170,295	+		Sama_1774	0.64	+0.6
2,170,295	+		Sama_1774	0.64	+0.3
2,170,296	-		Sama_1774	0.64	-0.3
2,170,442	+		Sama_1774	0.75	+1.4
2,170,443	-		Sama_1774	0.75	-0.9
2,170,475	+		Sama_1774	0.78	-0.4
2,170,476	-		Sama_1774	0.78	-1.3
2,170,476	-		Sama_1774	0.78	+0.9
2,170,598	+		Sama_1774	0.87	+0.2
2,170,769	+				+1.0
2,170,770	-				-0.6
2,170,779	+				-0.4
2,170,779	+				-0.3
2,170,779	+				+0.7
2,170,779	+				-0.8
2,170,779	+				+0.2
2,170,780	-				-1.1
2,170,799	+				-0.3
2,170,800	-				-0.1
2,170,800	-				-0.1
2,170,801	+				-1.4
2,170,801	+				+1.3
2,170,801	+				-0.9
2,170,801	+				-0.3
2,170,801	+				-1.0
2,170,801	+				-0.8
2,170,802	-		Sama_1775	0.10	+1.3
2,170,802	-		Sama_1775	0.10	-0.8
2,170,802	-		Sama_1775	0.10	-0.3
2,170,819	-		Sama_1775	0.15	+1.3
2,170,871	+		Sama_1775	0.29	-0.1
2,170,915	+		Sama_1775	0.40	-1.5
2,170,915	+		Sama_1775	0.40	-1.4
2,170,915	+		Sama_1775	0.40	+0.7
2,170,915	+		Sama_1775	0.40	+3.7
2,170,917	+		Sama_1775	0.41	-0.3
2,170,917	+		Sama_1775	0.41	-1.4
2,170,917	+		Sama_1775	0.41	-1.4
2,170,917	+		Sama_1775	0.41	-0.3
2,170,917	+		Sama_1775	0.41	-1.6
2,170,917	+		Sama_1775	0.41	+0.7
2,170,917	+		Sama_1775	0.41	-0.5
2,170,990	+		Sama_1775	0.60	-0.8
2,171,103	+				+4.5
2,171,103	+				+0.5
2,171,136	+				-0.3
2,171,143	+				+5.1
2,172,443	+				+0.7
2,172,467	+				-1.4
2,172,467	+				-0.7
2,172,467	+				-1.4
2,172,469	+				+1.0
2,172,469	+				+0.3
2,172,492	+		Sama_1777	0.18	-2.3
2,172,506	+		Sama_1777	0.30	-1.2
2,172,506	+		Sama_1777	0.30	+0.5
2,172,547	+		Sama_1777	0.64	+0.4
2,172,547	+		Sama_1777	0.64	+4.2
2,172,580	+				-0.8