Strain Fitness in Shewanella amazonensis SB2B around Sama_1620

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
1,984,339	+		Sama_1619	0.86	-1.6
1,984,339	+		Sama_1619	0.86	+0.0
1,984,339	+		Sama_1619	0.86	+0.8
1,984,339	+		Sama_1619	0.86	-2.9
1,984,339	+		Sama_1619	0.86	+2.1
1,984,339	+		Sama_1619	0.86	+0.2
1,984,339	+		Sama_1619	0.86	-0.8
1,984,339	+		Sama_1619	0.86	+0.2
1,984,339	+		Sama_1619	0.86	-1.8
1,984,339	+		Sama_1619	0.86	-1.3
1,984,339	+		Sama_1619	0.86	+2.1
1,984,339	+		Sama_1619	0.86	-0.6
1,984,339	+		Sama_1619	0.86	-1.4
1,984,340	-		Sama_1619	0.86	+0.4
1,984,340	-		Sama_1619	0.86	+0.2
1,984,340	-		Sama_1619	0.86	-0.2
1,984,340	-		Sama_1619	0.86	-1.2
1,984,340	-		Sama_1619	0.86	+0.3
1,984,340	-		Sama_1619	0.86	+0.8
1,984,340	-		Sama_1619	0.86	-2.0
1,984,384	+		Sama_1619	0.87	-2.0
1,984,385	-		Sama_1619	0.87	+0.8
1,984,385	-		Sama_1619	0.87	-0.0
1,984,385	-		Sama_1619	0.87	-0.2
1,984,388	+		Sama_1619	0.87	+0.0
1,984,389	-		Sama_1619	0.87	-2.1
1,984,423	+		Sama_1619	0.88	+0.8
1,984,424	-		Sama_1619	0.88	+0.2
1,984,435	+		Sama_1619	0.88	-0.4
1,984,444	+		Sama_1619	0.88	+0.4
1,984,444	+		Sama_1619	0.88	-0.4
1,984,444	+		Sama_1619	0.88	+1.4
1,984,445	-		Sama_1619	0.88	-1.0
1,984,481	+		Sama_1619	0.89	-0.2
1,984,579	+				-0.8
1,984,580	-				-0.6
1,984,581	+				-1.0
1,984,581	+				+0.2
1,984,581	+				+0.4
1,984,581	+				-0.8
1,984,582	-				+0.8
1,984,582	-				-0.0
1,984,582	-				-1.4
1,984,582	-				-1.6
1,984,639	+				-1.6
1,984,648	+				+0.8
1,984,648	+				+0.8
1,984,857	-				-1.6
1,984,857	-				+0.2
1,984,893	+				+0.2
1,984,912	+				+0.8
1,984,913	-				+1.4
1,984,956	+				-0.6
1,984,956	+				-2.0
1,984,956	+				-1.2
1,985,008	-				-0.6
1,985,016	-				-1.4
1,985,116	+				+2.8
1,985,116	+				-1.6
1,985,116	+				-1.1
1,985,117	-				-0.3
1,985,117	-				-0.1
1,985,117	-				-0.8
1,985,117	-				+1.8
1,985,117	-				-1.2
1,985,117	-				+0.3
1,985,118	+				-0.5
1,985,118	+				+0.1
1,985,118	+				-0.2
1,985,119	-				-0.8
1,985,119	-				+0.2
1,985,119	-				+0.2
1,985,119	-				+0.4
1,985,119	-				-0.6
1,985,172	-				-1.0
1,985,176	-				-2.0
1,985,181	+				+0.0
1,985,181	+				-0.0
1,985,181	+				+0.2
1,985,181	+				-1.2
1,985,182	-				+0.1
1,985,227	+				-1.3
1,985,227	+				-1.6
1,985,251	+				-0.9
1,985,252	-				+0.2
1,985,252	-				+1.0
1,985,252	-				+0.4
1,985,293	+				-0.8
1,985,474	+		Sama_1620	0.84	-0.1
1,985,475	-		Sama_1620	0.85	-1.1
1,985,475	-		Sama_1620	0.85	-0.7
1,985,529	+				+0.2
1,985,529	+				+0.4
1,985,531	+				+1.0
1,985,531	+				+0.2
1,985,531	+				-0.0
1,985,531	+				+2.8
1,985,532	-				-0.2
1,985,532	-				-1.7
1,985,545	+				-1.9
1,985,545	+				-0.2
1,985,545	+				+0.2
1,985,545	+				-1.3
1,985,619	+				+1.5
1,985,619	+				-0.4
1,985,765	+		Sama_1621	0.81	+2.8
1,985,889	+				-1.6
1,985,889	+				-0.2
1,985,890	-				-0.6
1,986,031	-				+0.9
1,986,058	+		Sama_1622	0.10	-0.2
1,986,058	+		Sama_1622	0.10	-0.5
1,986,058	+		Sama_1622	0.10	-0.8
1,986,180	+		Sama_1622	0.15	-0.0
1,986,181	-		Sama_1622	0.15	+1.4
1,986,237	+		Sama_1622	0.18	+0.8
1,986,238	-		Sama_1622	0.18	-0.2
1,986,274	+		Sama_1622	0.19	+1.8
1,986,274	+		Sama_1622	0.19	-2.1
1,986,366	+		Sama_1622	0.23	+0.4
1,986,367	-		Sama_1622	0.23	-1.4
1,986,403	+		Sama_1622	0.24	+3.0
1,986,404	-		Sama_1622	0.24	+0.8
1,986,404	-		Sama_1622	0.24	-0.0