Strain Fitness in Shewanella amazonensis SB2B around Sama_1483

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
1,795,155	-		Sama_1482	0.51	+0.3
1,795,155	-		Sama_1482	0.51	+0.5
1,795,155	-		Sama_1482	0.51	-0.2
1,795,155	-		Sama_1482	0.51	-0.3
1,795,155	-		Sama_1482	0.51	-1.6
1,795,155	-		Sama_1482	0.51	+1.4
1,795,262	+		Sama_1482	0.58	-1.2
1,795,269	+		Sama_1482	0.59	+1.3
1,795,269	+		Sama_1482	0.59	-0.8
1,795,269	+		Sama_1482	0.59	-1.2
1,795,269	+		Sama_1482	0.59	-0.8
1,795,269	+		Sama_1482	0.59	-0.7
1,795,269	+		Sama_1482	0.59	+1.8
1,795,270	-		Sama_1482	0.59	-0.0
1,795,271	+		Sama_1482	0.59	+1.0
1,795,271	+		Sama_1482	0.59	-1.0
1,795,271	+		Sama_1482	0.59	+0.7
1,795,272	-		Sama_1482	0.59	-1.1
1,795,272	-		Sama_1482	0.59	-1.0
1,795,272	-		Sama_1482	0.59	+0.8
1,795,272	-		Sama_1482	0.59	+1.2
1,795,272	-		Sama_1482	0.59	-0.1
1,795,322	+		Sama_1482	0.62	+0.2
1,795,323	-		Sama_1482	0.63	+1.4
1,795,351	-		Sama_1482	0.65	+0.2
1,795,413	+		Sama_1482	0.69	+0.8
1,795,413	+		Sama_1482	0.69	-0.2
1,795,413	+		Sama_1482	0.69	-0.2
1,795,493	+		Sama_1482	0.75	+1.8
1,795,494	-		Sama_1482	0.75	-1.6
1,795,617	+		Sama_1482	0.84	+0.1
1,795,617	+		Sama_1482	0.84	-0.3
1,795,618	-		Sama_1482	0.84	-2.5
1,795,618	-		Sama_1482	0.84	+0.1
1,795,618	-		Sama_1482	0.84	+1.1
1,795,801	+				-1.8
1,795,801	+				-1.5
1,795,890	+				+0.1
1,795,959	-				+0.8
1,796,027	+				+2.2
1,796,027	+				-0.7
1,796,028	-				+0.1
1,796,028	-				-0.9
1,796,039	+				-1.6
1,796,039	+				+1.2
1,796,039	+				+0.0
1,796,039	+				-0.8
1,796,040	-				+0.4
1,796,040	-				+1.2
1,796,040	-				+1.1
1,796,040	-				-2.6
1,796,040	-				-0.9
1,796,040	-				-0.7
1,796,040	-				-0.2
1,796,071	+				+0.4
1,796,072	-				-1.2
1,796,127	+				-1.5
1,796,127	+				-1.4
1,796,127	+				-2.3
1,796,127	+				-0.2
1,796,128	-				+0.2
1,796,128	-				-1.0
1,796,171	+		Sama_1483	0.10	+0.2
1,796,171	+		Sama_1483	0.10	+0.0
1,796,228	-		Sama_1483	0.16	-0.6
1,796,239	-		Sama_1483	0.17	+0.0
1,796,394	-		Sama_1483	0.31	-0.8
1,796,455	+		Sama_1483	0.37	+0.2
1,796,455	+		Sama_1483	0.37	+2.4
1,796,455	+		Sama_1483	0.37	+2.2
1,796,456	-		Sama_1483	0.37	-1.2
1,796,524	+		Sama_1483	0.43	+1.2
1,796,525	-		Sama_1483	0.44	-0.9
1,796,525	-		Sama_1483	0.44	+0.6
1,796,525	-		Sama_1483	0.44	+0.8
1,796,570	+		Sama_1483	0.48	+0.1
1,796,570	+		Sama_1483	0.48	-0.8
1,796,573	-		Sama_1483	0.48	-2.2
1,796,597	+		Sama_1483	0.50	+0.0
1,796,597	+		Sama_1483	0.50	-0.7
1,796,598	-		Sama_1483	0.50	+0.0
1,796,598	-		Sama_1483	0.50	+1.0
1,796,598	-		Sama_1483	0.50	-0.3
1,796,598	-		Sama_1483	0.50	-1.8
1,796,598	-		Sama_1483	0.50	-0.4
1,796,598	-		Sama_1483	0.50	-0.6
1,796,598	-		Sama_1483	0.50	-1.2
1,796,599	+		Sama_1483	0.51	+1.1
1,796,605	+		Sama_1483	0.51	+0.4
1,796,605	+		Sama_1483	0.51	-1.6
1,796,606	-		Sama_1483	0.51	-0.8
1,796,606	-		Sama_1483	0.51	-0.2
1,796,606	-		Sama_1483	0.51	+0.4
1,796,644	+		Sama_1483	0.55	+0.2
1,796,644	+		Sama_1483	0.55	-1.2
1,796,644	+		Sama_1483	0.55	+0.2
1,796,644	+		Sama_1483	0.55	-1.3
1,796,644	+		Sama_1483	0.55	+0.6
1,796,645	-		Sama_1483	0.55	-0.2
1,796,645	-		Sama_1483	0.55	+0.2
1,796,645	-		Sama_1483	0.55	-0.6
1,796,733	-		Sama_1483	0.63	+0.1
1,796,924	+		Sama_1483	0.81	-0.2
1,797,001	+		Sama_1483	0.88	+1.0
1,797,067	+				+0.2
1,797,068	-				+0.3
1,797,074	+				-1.0
1,797,075	-				-0.3
1,797,078	-				+1.8
1,797,097	+				-1.5
1,797,097	+				+1.0
1,797,125	+				+1.2
1,797,125	+				-1.6
1,797,125	+				-0.5
1,797,141	-				-0.6
1,797,145	+				-1.6
1,797,255	-				-1.8
1,797,308	+				-0.3
1,797,309	-				-0.3
1,797,309	-				+0.8
1,797,309	-				-0.5
1,797,309	-				+0.4
1,797,359	+				-1.0
1,797,359	+				+0.2
1,797,367	-				+1.1
1,797,367	-				-0.3
1,797,448	-		Sama_1484	0.11	+1.2
1,797,515	+		Sama_1484	0.17	+0.1
1,797,583	+		Sama_1484	0.23	+0.4
1,797,584	-		Sama_1484	0.23	-0.1
1,797,642	+		Sama_1484	0.28	+0.9
1,797,645	-		Sama_1484	0.28	+3.1
1,797,645	-		Sama_1484	0.28	-0.6
1,797,667	+		Sama_1484	0.30	+1.2
1,797,668	-		Sama_1484	0.30	+0.6
1,797,668	-		Sama_1484	0.30	-0.8
1,797,697	-		Sama_1484	0.33	-0.5
1,797,764	+		Sama_1484	0.39	+0.4
1,797,765	-		Sama_1484	0.39	-0.5
1,797,788	+		Sama_1484	0.41	-0.6
1,797,789	-		Sama_1484	0.41	+0.8
1,797,804	+		Sama_1484	0.42	-2.8
1,797,805	-		Sama_1484	0.42	+2.6
1,797,869	+		Sama_1484	0.48	+0.2
1,797,870	-		Sama_1484	0.48	-1.2
1,797,882	-		Sama_1484	0.49	+0.2
1,797,938	+		Sama_1484	0.54	+1.0
1,797,938	+		Sama_1484	0.54	+1.8
1,798,001	+		Sama_1484	0.60	-1.3
1,798,001	+		Sama_1484	0.60	-2.3
1,798,062	+		Sama_1484	0.65	+0.5
1,798,062	+		Sama_1484	0.65	+1.2