Strain Fitness in Shewanella amazonensis SB2B around Sama_1476

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
1,784,309	+				+0.1
1,784,309	+				-0.5
1,784,310	-				-0.3
1,784,374	+		Sama_1475	0.12	+0.5
1,784,375	-		Sama_1475	0.12	-1.9
1,784,412	-		Sama_1475	0.15	-1.4
1,784,412	-		Sama_1475	0.15	-0.5
1,784,466	+		Sama_1475	0.21	-0.6
1,784,467	-		Sama_1475	0.21	-1.9
1,784,490	+		Sama_1475	0.23	-1.0
1,784,491	-		Sama_1475	0.23	+0.4
1,784,491	-		Sama_1475	0.23	-0.2
1,784,491	-		Sama_1475	0.23	-0.3
1,784,607	+		Sama_1475	0.34	+1.0
1,784,607	+		Sama_1475	0.34	-1.5
1,784,607	+		Sama_1475	0.34	+0.0
1,784,608	-		Sama_1475	0.34	+0.2
1,784,658	+		Sama_1475	0.39	+0.8
1,784,726	+		Sama_1475	0.45	-0.3
1,784,726	+		Sama_1475	0.45	+1.8
1,784,727	-		Sama_1475	0.46	+0.2
1,784,727	-		Sama_1475	0.46	-1.9
1,784,727	-		Sama_1475	0.46	+0.0
1,784,758	+		Sama_1475	0.49	-1.6
1,784,759	-		Sama_1475	0.49	-0.6
1,784,759	-		Sama_1475	0.49	-1.0
1,784,843	-		Sama_1475	0.57	+0.0
1,784,861	+		Sama_1475	0.58	-0.3
1,784,861	+		Sama_1475	0.58	-1.3
1,784,861	+		Sama_1475	0.58	-1.3
1,784,861	+		Sama_1475	0.58	-2.5
1,784,904	+		Sama_1475	0.62	+1.6
1,784,904	+		Sama_1475	0.62	+0.7
1,784,904	+		Sama_1475	0.62	+0.0
1,784,904	+		Sama_1475	0.62	-0.5
1,784,904	+		Sama_1475	0.62	+0.1
1,784,974	-		Sama_1475	0.69	+0.0
1,784,987	+		Sama_1475	0.70	-1.7
1,785,004	+		Sama_1475	0.72	+0.5
1,785,047	+		Sama_1475	0.76	+0.5
1,785,058	+		Sama_1475	0.77	+1.8
1,785,141	+		Sama_1475	0.85	-0.6
1,785,141	+		Sama_1475	0.85	+1.0
1,785,142	-		Sama_1475	0.85	+0.2
1,785,142	-		Sama_1475	0.85	-0.5
1,785,159	-		Sama_1475	0.87	-2.1
1,785,186	+		Sama_1475	0.89	+0.2
1,785,186	+		Sama_1475	0.89	-0.2
1,785,186	+		Sama_1475	0.89	+0.2
1,785,189	+		Sama_1475	0.90	+0.8
1,785,189	+		Sama_1475	0.90	-0.4
1,785,189	+		Sama_1475	0.90	+0.2
1,785,190	-		Sama_1475	0.90	+2.2
1,785,190	-		Sama_1475	0.90	-0.6
1,785,192	+				+0.5
1,785,192	+				+0.8
1,785,193	-				+0.0
1,785,193	-				-0.2
1,785,218	+				+0.2
1,785,245	+				+0.8
1,785,251	-				-1.3
1,785,355	+		Sama_1476	0.12	+1.2
1,785,355	+		Sama_1476	0.12	-0.2
1,785,355	+		Sama_1476	0.12	-0.3
1,785,455	+		Sama_1476	0.32	+2.4
1,785,455	+		Sama_1476	0.32	-1.0
1,785,455	+		Sama_1476	0.32	+1.0
1,785,455	+		Sama_1476	0.32	-0.5
1,785,455	+		Sama_1476	0.32	-1.4
1,785,455	+		Sama_1476	0.32	-0.3
1,785,455	+		Sama_1476	0.32	+0.7
1,785,455	+		Sama_1476	0.32	+0.5
1,785,455	+		Sama_1476	0.32	+0.9
1,785,456	-		Sama_1476	0.33	-0.2
1,785,456	-		Sama_1476	0.33	-0.9
1,785,456	-		Sama_1476	0.33	+0.7
1,785,456	-		Sama_1476	0.33	-1.2
1,785,457	+		Sama_1476	0.33	-0.3
1,785,457	+		Sama_1476	0.33	+1.0
1,785,458	-		Sama_1476	0.33	-0.6
1,785,490	-		Sama_1476	0.39	+0.2
1,785,536	+		Sama_1476	0.49	-1.1
1,785,536	+		Sama_1476	0.49	+0.8
1,785,536	+		Sama_1476	0.49	-0.2
1,785,537	-		Sama_1476	0.49	+0.6
1,785,537	-		Sama_1476	0.49	-0.5
1,785,547	+		Sama_1476	0.51	-1.5
1,785,651	+		Sama_1476	0.71	+1.4
1,785,651	+		Sama_1476	0.71	-0.3
1,785,716	+		Sama_1476	0.84	+1.1
1,785,717	-		Sama_1476	0.85	-1.3
1,785,750	+				-0.9
1,785,791	+				+0.2
1,785,792	-				-0.8
1,785,946	+				+1.2
1,785,972	+				-1.2
1,786,141	+				+0.6
1,786,141	+				+2.8
1,786,165	-				-0.8
1,786,165	-				-1.5
1,786,181	-				-1.2
1,786,224	+				+0.3
1,786,237	-				+0.2
1,786,261	-				+0.8
1,786,391	+		Sama_1477	0.12	+0.4
1,786,392	-		Sama_1477	0.12	-0.3
1,786,392	-		Sama_1477	0.12	-0.3
1,786,392	-		Sama_1477	0.12	-0.0
1,786,395	-		Sama_1477	0.12	-0.5
1,786,416	+		Sama_1477	0.13	-0.3
1,786,491	+		Sama_1477	0.15	-1.8
1,786,491	+		Sama_1477	0.15	-0.3
1,786,492	-		Sama_1477	0.15	-0.7
1,786,538	-		Sama_1477	0.17	-0.5
1,786,538	-		Sama_1477	0.17	+0.8
1,786,538	-		Sama_1477	0.17	+0.0
1,786,677	+		Sama_1477	0.22	-0.5
1,786,701	+		Sama_1477	0.23	-0.8
1,786,702	-		Sama_1477	0.23	+0.4
1,786,702	-		Sama_1477	0.23	-0.3