Strain Fitness in Shewanella amazonensis SB2B around Sama_1404

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
1,703,062	-		Sama_1403	0.22	-0.6
1,703,988	-				-0.0
1,703,999	+				-0.1
1,703,999	+				+0.2
1,704,000	-				-0.8
1,704,018	+				-1.0
1,704,019	-				-2.3
1,704,061	-				+1.8
1,704,147	+				-1.0
1,704,148	-				-0.9
1,704,169	+				-0.2
1,704,169	+				-0.6
1,704,210	+				+0.1
1,704,210	+				-0.3
1,704,210	+				+1.4
1,704,210	+				-0.7
1,704,210	+				-0.6
1,704,210	+				-2.0
1,704,211	-				+0.4
1,704,256	-				-1.2
1,704,256	-				-0.4
1,704,348	+		Sama_1404	0.12	-0.9
1,704,349	-		Sama_1404	0.12	-0.6
1,704,349	-		Sama_1404	0.12	+0.8
1,704,352	-		Sama_1404	0.12	-0.7
1,704,352	-		Sama_1404	0.12	+0.8
1,704,352	-		Sama_1404	0.12	-2.1
1,704,398	-		Sama_1404	0.14	-1.3
1,704,429	-		Sama_1404	0.15	+0.8
1,704,546	+		Sama_1404	0.20	-1.2
1,704,652	+		Sama_1404	0.24	-1.0
1,704,652	+		Sama_1404	0.24	-0.2
1,704,652	+		Sama_1404	0.24	+0.0
1,704,652	+		Sama_1404	0.24	+0.4
1,704,653	-		Sama_1404	0.24	-1.5
1,704,661	+		Sama_1404	0.24	-2.3
1,704,661	+		Sama_1404	0.24	-0.3
1,704,662	-		Sama_1404	0.24	-2.2
1,704,691	+		Sama_1404	0.25	-0.9
1,704,751	+		Sama_1404	0.28	-0.8
1,704,752	-		Sama_1404	0.28	-0.2
1,704,752	-		Sama_1404	0.28	-0.5
1,704,752	-		Sama_1404	0.28	-0.8
1,704,798	+		Sama_1404	0.29	-0.2
1,704,799	-		Sama_1404	0.30	-2.3
1,704,827	+		Sama_1404	0.31	-0.8
1,704,828	-		Sama_1404	0.31	-0.5
1,704,846	-		Sama_1404	0.31	-1.0
1,704,846	-		Sama_1404	0.31	-1.6
1,704,865	+		Sama_1404	0.32	+0.7
1,704,865	+		Sama_1404	0.32	-1.0
1,704,865	+		Sama_1404	0.32	-0.6
1,704,866	-		Sama_1404	0.32	-1.3
1,704,913	-		Sama_1404	0.34	-0.2
1,704,949	+		Sama_1404	0.35	-1.6
1,704,949	+		Sama_1404	0.35	+0.8
1,704,949	+		Sama_1404	0.35	-0.7
1,704,949	+		Sama_1404	0.35	-0.5
1,704,950	-		Sama_1404	0.35	+0.7
1,705,043	-		Sama_1404	0.39	-0.5
1,705,082	+		Sama_1404	0.41	-2.3
1,705,082	+		Sama_1404	0.41	-1.0
1,705,082	+		Sama_1404	0.41	-2.8
1,705,083	-		Sama_1404	0.41	-0.2
1,705,117	+		Sama_1404	0.42	+0.2
1,705,118	-		Sama_1404	0.42	-2.1
1,705,125	+		Sama_1404	0.42	+2.2
1,705,125	+		Sama_1404	0.42	+1.8
1,705,249	+		Sama_1404	0.47	+1.2
1,705,271	+		Sama_1404	0.48	-1.2
1,705,572	+		Sama_1404	0.59	+0.4
1,705,573	-		Sama_1404	0.60	-1.5
1,705,612	+		Sama_1404	0.61	-1.3
1,705,612	+		Sama_1404	0.61	+0.1
1,705,613	-		Sama_1404	0.61	-1.4
1,705,663	+		Sama_1404	0.63	-0.8
1,705,664	-		Sama_1404	0.63	+1.2
1,706,262	+		Sama_1404	0.86	+0.7
1,706,402	+				+1.6
1,706,403	-				-0.1
1,706,685	+				+0.0
1,706,685	+				+0.8
1,706,685	+				+0.2
1,706,686	-				-1.3
1,706,755	+				+0.8
1,706,755	+				-1.6
1,706,755	+				-0.5
1,706,755	+				-0.5
1,706,770	+				-0.3
1,706,770	+				-0.6
1,706,770	+				+0.0
1,706,771	-				+0.2
1,706,774	+				-0.9
1,706,774	+				-1.8
1,706,775	-				-0.3
1,706,788	-		Sama_1405	0.11	+0.1
1,706,870	+		Sama_1405	0.20	+2.8
1,706,870	+		Sama_1405	0.20	-0.9
1,706,905	+		Sama_1405	0.24	-1.8
1,706,905	+		Sama_1405	0.24	-1.0
1,706,948	+		Sama_1405	0.29	+1.8
1,707,056	-		Sama_1405	0.40	+0.2
1,707,102	-		Sama_1405	0.45	-1.0
1,707,102	-		Sama_1405	0.45	-0.5
1,707,112	+		Sama_1405	0.46	-1.2
1,707,112	+		Sama_1405	0.46	+1.0
1,707,113	-		Sama_1405	0.46	+1.1
1,707,113	-		Sama_1405	0.46	-1.0
1,707,113	-		Sama_1405	0.46	+1.2
1,707,113	-		Sama_1405	0.46	+0.8
1,707,113	-		Sama_1405	0.46	+0.5
1,707,185	+		Sama_1405	0.54	+0.8
1,707,185	+		Sama_1405	0.54	-0.6
1,707,186	-		Sama_1405	0.54	+0.5
1,707,186	-		Sama_1405	0.54	-0.8
1,707,357	-		Sama_1405	0.72	-0.9
1,707,389	+		Sama_1405	0.76	+0.2
1,707,415	+		Sama_1405	0.79	-1.0
1,707,416	-		Sama_1405	0.79	+1.0
1,707,453	+		Sama_1405	0.83	-0.5
1,707,453	+		Sama_1405	0.83	+0.5
1,707,453	+		Sama_1405	0.83	-0.1
1,707,454	-		Sama_1405	0.83	-0.2
1,707,459	+		Sama_1405	0.83	-0.4
1,707,459	+		Sama_1405	0.83	+0.6
1,707,460	-		Sama_1405	0.83	+0.6
1,707,483	+		Sama_1405	0.86	-0.5
1,707,483	+		Sama_1405	0.86	+1.8
1,707,483	+		Sama_1405	0.86	-0.4
1,707,483	+		Sama_1405	0.86	+1.8
1,707,483	+		Sama_1405	0.86	-1.0
1,707,483	+		Sama_1405	0.86	+0.6
1,707,483	+		Sama_1405	0.86	+0.0
1,707,483	+		Sama_1405	0.86	+1.3
1,707,484	-		Sama_1405	0.86	-1.2
1,707,484	-		Sama_1405	0.86	-0.2
1,707,612	+				-0.1
1,707,612	+				+1.5
1,707,612	+				+1.1
1,707,613	-				-0.8
1,707,613	-				-1.3
1,707,613	-				-0.8
1,707,616	+				+0.7
1,707,616	+				-1.3
1,707,616	+				-1.2
1,707,616	+				-0.2