Strain Fitness in Shewanella amazonensis SB2B around Sama_1395

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
1,686,941	+		Sama_1394	0.70	+5.0
1,686,941	+		Sama_1394	0.70	+3.8
1,686,942	-		Sama_1394	0.70	+4.2
1,686,942	-		Sama_1394	0.70	+6.4
1,686,942	-		Sama_1394	0.70	+5.4
1,686,942	-		Sama_1394	0.70	+4.6
1,686,969	-		Sama_1394	0.72	+4.8
1,687,077	+		Sama_1394	0.77	+3.3
1,687,078	-		Sama_1394	0.77	+6.0
1,687,109	+		Sama_1394	0.78	+4.2
1,687,109	+		Sama_1394	0.78	+4.6
1,687,109	+		Sama_1394	0.78	+4.2
1,687,109	+		Sama_1394	0.78	+4.8
1,687,117	-		Sama_1394	0.78	+4.8
1,687,117	-		Sama_1394	0.78	+4.7
1,687,117	-		Sama_1394	0.78	+4.4
1,687,142	+		Sama_1394	0.80	+4.2
1,687,143	-		Sama_1394	0.80	+5.1
1,687,143	-		Sama_1394	0.80	+5.8
1,687,143	-		Sama_1394	0.80	+3.8
1,687,143	-		Sama_1394	0.80	+5.1
1,687,143	-		Sama_1394	0.80	+4.8
1,687,270	-		Sama_1394	0.86	+4.2
1,687,459	+				+5.1
1,687,460	-				+6.5
1,687,480	-				+3.1
1,687,480	-				+5.5
1,687,498	-				+3.6
1,687,654	-				+1.0
1,687,721	-				-1.3
1,687,737	+				+3.2
1,687,737	+				+0.9
1,687,738	-				-0.9
1,687,738	-				+0.8
1,687,739	+				+0.5
1,687,739	+				-1.2
1,687,740	-				-0.5
1,687,781	+				-1.3
1,687,782	-				-0.6
1,687,782	-				-0.0
1,687,788	+				-0.6
1,687,810	+				+0.0
1,687,853	+				-0.2
1,687,920	+		Sama_1395	0.20	-0.9
1,687,945	+		Sama_1395	0.26	+0.4
1,687,947	+		Sama_1395	0.26	+0.7
1,687,947	+		Sama_1395	0.26	-1.9
1,687,947	+		Sama_1395	0.26	+1.4
1,687,947	+		Sama_1395	0.26	-0.4
1,688,001	+		Sama_1395	0.38	-0.8
1,688,001	+		Sama_1395	0.38	-0.3
1,688,002	-		Sama_1395	0.39	+1.3
1,688,002	-		Sama_1395	0.39	-0.8
1,688,041	-		Sama_1395	0.47	-0.7
1,688,041	-		Sama_1395	0.47	-1.2
1,688,109	+		Sama_1395	0.63	+0.7
1,688,109	+		Sama_1395	0.63	-0.4
1,688,109	+		Sama_1395	0.63	-0.8
1,688,169	+		Sama_1395	0.76	+0.1
1,688,169	+		Sama_1395	0.76	-1.1
1,688,170	-		Sama_1395	0.76	-0.5
1,688,174	-		Sama_1395	0.77	-1.8
1,688,174	-		Sama_1395	0.77	+0.1
1,688,262	+				-1.3
1,688,311	+				+0.1
1,688,360	+				-0.5
1,688,361	-				+0.8
1,688,424	-				-0.9
1,688,438	-				+0.0
1,688,444	+				-0.8
1,688,444	+				-0.9
1,688,445	-				+0.6
1,688,445	-				-0.9
1,688,446	+				-0.2
1,688,447	-				-1.7
1,688,447	-				-0.4
1,688,454	-				-0.8
1,688,454	-				-1.3
1,688,511	+				+0.1
1,688,643	-				+2.4
1,688,666	-				+1.8
1,688,814	+				+0.1
1,688,864	+				+0.5
1,688,959	+				-1.6
1,688,960	-				-1.9
1,689,024	+				-0.6
1,689,025	-				+1.1
1,689,025	-				+0.8
1,689,025	-				-0.4
1,689,062	+		Sama_1396	0.10	-0.6
1,689,062	+		Sama_1396	0.10	+0.2
1,689,062	+		Sama_1396	0.10	-1.6
1,689,062	+		Sama_1396	0.10	+0.6
1,689,063	-		Sama_1396	0.11	-0.3
1,689,063	-		Sama_1396	0.11	-1.5
1,689,073	+		Sama_1396	0.11	-0.6
1,689,073	+		Sama_1396	0.11	+0.8
1,689,073	+		Sama_1396	0.11	-1.1
1,689,074	-		Sama_1396	0.11	+0.2
1,689,074	-		Sama_1396	0.11	+0.8
1,689,074	-		Sama_1396	0.11	-1.6
1,689,074	-		Sama_1396	0.11	-0.2
1,689,074	-		Sama_1396	0.11	+1.3
1,689,111	+		Sama_1396	0.12	+0.8
1,689,111	+		Sama_1396	0.12	-0.3
1,689,111	+		Sama_1396	0.12	-0.0
1,689,111	+		Sama_1396	0.12	+1.5
1,689,113	+		Sama_1396	0.12	+1.4
1,689,113	+		Sama_1396	0.12	-0.3
1,689,114	-		Sama_1396	0.12	-0.3
1,689,114	-		Sama_1396	0.12	-1.0
1,689,114	-		Sama_1396	0.12	-1.0
1,689,114	-		Sama_1396	0.12	-0.1