Strain Fitness in Shewanella amazonensis SB2B around Sama_1394

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
1,684,468	+		Sama_1392	0.89	-0.8
1,684,469	-		Sama_1392	0.89	-0.3
1,684,497	+				-0.8
1,684,526	+				-0.9
1,684,527	-				+0.7
1,684,627	+				+0.5
1,684,627	+				-0.3
1,684,628	-				+0.0
1,684,716	+				-0.9
1,684,838	+		Sama_1393	0.18	-1.6
1,684,879	-		Sama_1393	0.26	-0.5
1,684,879	-		Sama_1393	0.26	-0.6
1,684,879	-		Sama_1393	0.26	-0.8
1,684,879	-		Sama_1393	0.26	+0.8
1,684,949	+		Sama_1393	0.38	-0.4
1,684,976	+		Sama_1393	0.43	-0.3
1,684,976	+		Sama_1393	0.43	+0.8
1,684,976	+		Sama_1393	0.43	+0.5
1,684,976	+		Sama_1393	0.43	+2.1
1,684,976	+		Sama_1393	0.43	-0.2
1,684,976	+		Sama_1393	0.43	-0.9
1,684,976	+		Sama_1393	0.43	+0.6
1,684,977	-		Sama_1393	0.43	+1.0
1,684,977	-		Sama_1393	0.43	-0.2
1,684,977	-		Sama_1393	0.43	+2.2
1,684,988	+		Sama_1393	0.45	+1.4
1,684,988	+		Sama_1393	0.45	-2.5
1,684,989	-		Sama_1393	0.45	-1.2
1,684,989	-		Sama_1393	0.45	+0.7
1,685,005	+		Sama_1393	0.48	-1.2
1,685,036	+		Sama_1393	0.54	+0.6
1,685,036	+		Sama_1393	0.54	+1.0
1,685,042	+		Sama_1393	0.55	-0.5
1,685,042	+		Sama_1393	0.55	+0.4
1,685,043	-		Sama_1393	0.55	-0.6
1,685,043	-		Sama_1393	0.55	-1.5
1,685,171	+		Sama_1393	0.78	+1.8
1,685,217	+		Sama_1393	0.86	+0.2
1,685,218	-		Sama_1393	0.86	-2.1
1,685,218	-		Sama_1393	0.86	+0.8
1,685,218	-		Sama_1393	0.86	-0.8
1,685,222	+		Sama_1393	0.87	-0.5
1,685,223	-		Sama_1393	0.87	-1.3
1,685,223	-		Sama_1393	0.87	-1.3
1,685,344	+				-1.0
1,685,344	+				+0.5
1,685,345	-				+0.4
1,685,370	+				+0.1
1,685,371	-				+0.2
1,685,438	+				-0.2
1,685,439	-				+0.5
1,685,439	-				+0.1
1,685,439	-				-1.0
1,685,490	+				+0.7
1,685,532	-				+2.2
1,685,532	-				+2.6
1,685,588	+				+4.4
1,685,593	-				+3.2
1,685,646	-				+1.1
1,685,716	-		Sama_1394	0.13	+3.2
1,685,781	-		Sama_1394	0.16	+2.9
1,685,781	-		Sama_1394	0.16	+1.5
1,685,785	-		Sama_1394	0.16	+3.5
1,685,803	-		Sama_1394	0.17	+3.2
1,685,803	-		Sama_1394	0.17	+2.6
1,685,819	+		Sama_1394	0.18	-0.3
1,685,820	-		Sama_1394	0.18	+0.2
1,685,820	-		Sama_1394	0.18	+1.1
1,685,856	-		Sama_1394	0.20	+3.3
1,685,981	+		Sama_1394	0.25	+1.8
1,686,019	+		Sama_1394	0.27	+0.5
1,686,021	-		Sama_1394	0.27	+2.3
1,686,157	-		Sama_1394	0.34	+3.2
1,686,157	-		Sama_1394	0.34	+4.7
1,686,159	-		Sama_1394	0.34	+3.5
1,686,172	-		Sama_1394	0.34	+3.7
1,686,176	+		Sama_1394	0.35	+2.6
1,686,176	+		Sama_1394	0.35	+2.5
1,686,267	-		Sama_1394	0.39	+4.0
1,686,301	+		Sama_1394	0.40	+3.4
1,686,354	-		Sama_1394	0.43	+1.8
1,686,354	-		Sama_1394	0.43	+5.0
1,686,394	-		Sama_1394	0.45	+4.0
1,686,422	-		Sama_1394	0.46	+5.8
1,686,422	-		Sama_1394	0.46	+5.3
1,686,422	-		Sama_1394	0.46	+4.8
1,686,422	-		Sama_1394	0.46	+4.3
1,686,434	+		Sama_1394	0.47	+4.3
1,686,435	-		Sama_1394	0.47	+5.2
1,686,446	+		Sama_1394	0.47	+2.3
1,686,446	+		Sama_1394	0.47	+4.2
1,686,452	-		Sama_1394	0.47	+5.1
1,686,452	-		Sama_1394	0.47	+5.6
1,686,578	+		Sama_1394	0.53	+4.2
1,686,579	-		Sama_1394	0.53	+4.6
1,686,579	-		Sama_1394	0.53	+4.6
1,686,609	-		Sama_1394	0.55	+6.0
1,686,609	-		Sama_1394	0.55	+5.2
1,686,609	-		Sama_1394	0.55	+3.8
1,686,609	-		Sama_1394	0.55	+3.6
1,686,616	+		Sama_1394	0.55	+4.1
1,686,617	-		Sama_1394	0.55	+5.2
1,686,657	-		Sama_1394	0.57	+5.3
1,686,737	+		Sama_1394	0.61	+4.7
1,686,806	+		Sama_1394	0.64	+4.8
1,686,807	-		Sama_1394	0.64	+3.3
1,686,812	+		Sama_1394	0.64	+3.9
1,686,812	+		Sama_1394	0.64	+2.2
1,686,817	+		Sama_1394	0.64	+4.7
1,686,818	-		Sama_1394	0.64	+5.4
1,686,941	+		Sama_1394	0.70	+5.0
1,686,941	+		Sama_1394	0.70	+3.8
1,686,942	-		Sama_1394	0.70	+4.2
1,686,942	-		Sama_1394	0.70	+6.4
1,686,942	-		Sama_1394	0.70	+5.4
1,686,942	-		Sama_1394	0.70	+4.6
1,686,969	-		Sama_1394	0.72	+4.8
1,687,077	+		Sama_1394	0.77	+3.3
1,687,078	-		Sama_1394	0.77	+6.0
1,687,109	+		Sama_1394	0.78	+4.2
1,687,109	+		Sama_1394	0.78	+4.6
1,687,109	+		Sama_1394	0.78	+4.2
1,687,109	+		Sama_1394	0.78	+4.8
1,687,117	-		Sama_1394	0.78	+4.8
1,687,117	-		Sama_1394	0.78	+4.7
1,687,117	-		Sama_1394	0.78	+4.4
1,687,142	+		Sama_1394	0.80	+4.2
1,687,143	-		Sama_1394	0.80	+5.1
1,687,143	-		Sama_1394	0.80	+5.8
1,687,143	-		Sama_1394	0.80	+3.8
1,687,143	-		Sama_1394	0.80	+5.1
1,687,143	-		Sama_1394	0.80	+4.8
1,687,270	-		Sama_1394	0.86	+4.2
1,687,459	+				+5.1
1,687,460	-				+6.5
1,687,480	-				+3.1
1,687,480	-				+5.5
1,687,498	-				+3.6
1,687,654	-				+1.0
1,687,721	-				-1.3
1,687,737	+				+3.2
1,687,737	+				+0.9
1,687,738	-				-0.9
1,687,738	-				+0.8
1,687,739	+				+0.5
1,687,739	+				-1.2
1,687,740	-				-0.5
1,687,781	+				-1.3
1,687,782	-				-0.6
1,687,782	-				-0.0
1,687,788	+				-0.6
1,687,810	+				+0.0
1,687,853	+				-0.2
1,687,920	+		Sama_1395	0.20	-0.9
1,687,945	+		Sama_1395	0.26	+0.4
1,687,947	+		Sama_1395	0.26	+0.7
1,687,947	+		Sama_1395	0.26	-1.9
1,687,947	+		Sama_1395	0.26	+1.4
1,687,947	+		Sama_1395	0.26	-0.4
1,688,001	+		Sama_1395	0.38	-0.8
1,688,001	+		Sama_1395	0.38	-0.3
1,688,002	-		Sama_1395	0.39	+1.3
1,688,002	-		Sama_1395	0.39	-0.8
1,688,041	-		Sama_1395	0.47	-0.7
1,688,041	-		Sama_1395	0.47	-1.2
1,688,109	+		Sama_1395	0.63	+0.7
1,688,109	+		Sama_1395	0.63	-0.4
1,688,109	+		Sama_1395	0.63	-0.8
1,688,169	+		Sama_1395	0.76	+0.1
1,688,169	+		Sama_1395	0.76	-1.1
1,688,170	-		Sama_1395	0.76	-0.5
1,688,174	-		Sama_1395	0.77	-1.8
1,688,174	-		Sama_1395	0.77	+0.1
1,688,262	+				-1.3
1,688,311	+				+0.1
1,688,360	+				-0.5
1,688,361	-				+0.8
1,688,424	-				-0.9
1,688,438	-				+0.0
1,688,444	+				-0.8
1,688,444	+				-0.9
1,688,445	-				+0.6
1,688,445	-				-0.9
1,688,446	+				-0.2
1,688,447	-				-1.7
1,688,447	-				-0.4
1,688,454	-				-0.8
1,688,454	-				-1.3
1,688,511	+				+0.1