Strain Fitness in Shewanella amazonensis SB2B around Sama_1391

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
1,681,182	-		Sama_1389	0.74	+0.0
1,681,190	+		Sama_1389	0.76	+1.5
1,681,190	+		Sama_1389	0.76	-1.3
1,681,191	-		Sama_1389	0.76	-0.2
1,681,393	-		Sama_1390	0.13	+0.8
1,681,393	-		Sama_1390	0.13	-0.3
1,681,393	-		Sama_1390	0.13	+1.2
1,681,431	-		Sama_1390	0.18	-0.4
1,681,498	+		Sama_1390	0.28	-1.2
1,681,498	+		Sama_1390	0.28	+0.2
1,681,498	+		Sama_1390	0.28	+0.8
1,681,498	+		Sama_1390	0.28	-0.2
1,681,499	-		Sama_1390	0.28	-0.6
1,681,503	+		Sama_1390	0.28	-0.3
1,681,503	+		Sama_1390	0.28	-0.5
1,681,503	+		Sama_1390	0.28	-0.8
1,681,600	+		Sama_1390	0.42	+0.8
1,681,600	+		Sama_1390	0.42	+0.1
1,681,600	+		Sama_1390	0.42	-0.5
1,681,601	-		Sama_1390	0.43	-0.9
1,681,601	-		Sama_1390	0.43	+1.2
1,681,614	+		Sama_1390	0.44	-0.2
1,681,615	-		Sama_1390	0.45	+0.1
1,681,693	-		Sama_1390	0.56	+0.4
1,681,791	+		Sama_1390	0.70	-0.1
1,681,792	-		Sama_1390	0.70	+0.4
1,681,994	-				-0.6
1,682,042	+				-0.8
1,682,042	+				-1.2
1,682,043	-				-0.3
1,682,065	+				+0.8
1,682,066	-				-0.2
1,682,170	+				+0.5
1,682,170	+				+0.0
1,682,170	+				-0.8
1,682,170	+				-1.3
1,682,171	-				-0.8
1,682,171	-				-0.0
1,682,171	-				+1.6
1,682,171	-				-0.3
1,682,171	-				+0.5
1,682,171	-				+1.2
1,682,171	-				+0.8
1,682,171	-				-0.9
1,682,238	-		Sama_1391	0.11	+0.5
1,682,283	-		Sama_1391	0.19	-0.3
1,682,302	+		Sama_1391	0.22	+0.8
1,682,354	-		Sama_1391	0.31	-0.7
1,682,378	+		Sama_1391	0.35	-1.6
1,682,397	+		Sama_1391	0.38	-0.1
1,682,426	+		Sama_1391	0.43	-2.8
1,682,513	+		Sama_1391	0.58	+0.2
1,682,514	-		Sama_1391	0.58	-1.3
1,682,514	-		Sama_1391	0.58	-1.8
1,682,514	-		Sama_1391	0.58	-1.5
1,682,528	+		Sama_1391	0.60	-0.2
1,682,597	+		Sama_1391	0.72	+0.7
1,682,597	+		Sama_1391	0.72	+1.2
1,682,710	-				-0.3
1,682,792	-				-1.1
1,682,919	+				-0.3
1,683,098	+		Sama_1392	0.17	-1.3
1,683,098	+		Sama_1392	0.17	-1.2
1,683,177	+		Sama_1392	0.22	+1.8
1,683,303	+		Sama_1392	0.28	-2.8
1,683,303	+		Sama_1392	0.28	-1.6
1,683,303	+		Sama_1392	0.28	-0.3
1,683,303	+		Sama_1392	0.28	+0.1
1,683,303	+		Sama_1392	0.28	-0.3
1,683,304	-		Sama_1392	0.28	-0.8
1,683,304	-		Sama_1392	0.28	+0.2
1,683,392	+		Sama_1392	0.33	+0.3
1,683,393	-		Sama_1392	0.33	-0.4
1,683,412	+		Sama_1392	0.34	-0.8
1,683,412	+		Sama_1392	0.34	+0.2
1,683,705	-		Sama_1392	0.49	+1.8