Strain Fitness in Shewanella amazonensis SB2B around Sama_1384

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
1,675,161	+		Sama_1383	0.58	+1.1
1,675,161	+		Sama_1383	0.58	+0.4
1,675,204	-		Sama_1383	0.60	-0.3
1,675,220	-		Sama_1383	0.61	-1.3
1,675,225	+		Sama_1383	0.61	-0.5
1,675,248	+		Sama_1383	0.62	-1.0
1,675,325	-		Sama_1383	0.66	-0.3
1,675,342	+		Sama_1383	0.67	-1.0
1,675,412	-		Sama_1383	0.70	-1.2
1,675,427	-		Sama_1383	0.71	-1.0
1,675,567	+		Sama_1383	0.78	+0.2
1,675,581	+		Sama_1383	0.78	-1.5
1,675,581	+		Sama_1383	0.78	-1.8
1,675,607	+		Sama_1383	0.80	-0.5
1,675,617	-		Sama_1383	0.80	+0.0
1,675,617	-		Sama_1383	0.80	-0.2
1,675,641	+		Sama_1383	0.81	-0.6
1,675,740	+		Sama_1383	0.86	+0.8
1,675,740	+		Sama_1383	0.86	-0.2
1,675,741	-		Sama_1383	0.86	+0.2
1,675,741	-		Sama_1383	0.86	-0.2
1,675,741	-		Sama_1383	0.86	+0.0
1,675,751	+		Sama_1383	0.87	+0.2
1,675,751	+		Sama_1383	0.87	+0.5
1,675,752	-		Sama_1383	0.87	+0.2
1,675,787	+		Sama_1383	0.88	-0.6
1,675,913	-				-0.2
1,675,927	+				+0.5
1,676,019	+				-0.2
1,676,026	+				+0.8
1,676,026	+				-0.5
1,676,026	+				+0.6
1,676,027	-				+0.3
1,676,027	-				-0.5
1,676,027	-				-0.8
1,676,039	-				-0.2
1,676,051	-				+0.2
1,676,124	+				+0.5
1,676,124	+				-1.3
1,676,124	+				-1.2
1,676,125	-				+2.8
1,676,296	-		Sama_1384	0.25	+0.5
1,676,303	+		Sama_1384	0.26	+1.0
1,676,303	+		Sama_1384	0.26	+1.1
1,676,303	+		Sama_1384	0.26	-1.0
1,676,304	-		Sama_1384	0.27	-1.5
1,676,304	-		Sama_1384	0.27	+1.4
1,676,304	-		Sama_1384	0.27	-0.8
1,676,304	-		Sama_1384	0.27	-0.5
1,676,358	-		Sama_1384	0.35	-0.9
1,676,368	+		Sama_1384	0.36	+0.4
1,676,368	+		Sama_1384	0.36	-2.1
1,676,369	-		Sama_1384	0.36	-0.8
1,676,369	-		Sama_1384	0.36	-0.2
1,676,382	+		Sama_1384	0.38	-0.7
1,676,383	-		Sama_1384	0.38	-0.0
1,676,422	+		Sama_1384	0.44	-0.2
1,676,422	+		Sama_1384	0.44	-1.3
1,676,423	-		Sama_1384	0.44	+0.0
1,676,423	-		Sama_1384	0.44	+2.8
1,676,424	+		Sama_1384	0.44	-0.3
1,676,424	+		Sama_1384	0.44	-0.5
1,676,424	+		Sama_1384	0.44	-1.4
1,676,425	-		Sama_1384	0.44	+0.1
1,676,425	-		Sama_1384	0.44	-2.4
1,676,425	-		Sama_1384	0.44	-2.6
1,676,425	-		Sama_1384	0.44	-1.9
1,676,425	-		Sama_1384	0.44	-1.0
1,676,429	+		Sama_1384	0.45	-1.5
1,676,430	-		Sama_1384	0.45	-1.8
1,676,430	-		Sama_1384	0.45	+0.8
1,676,487	+		Sama_1384	0.53	+1.8
1,676,601	+		Sama_1384	0.70	-1.2
1,676,647	-		Sama_1384	0.77	+0.8
1,676,649	+		Sama_1384	0.77	+1.0
1,676,649	+		Sama_1384	0.77	-0.3
1,676,649	+		Sama_1384	0.77	-1.5
1,676,650	-		Sama_1384	0.77	-0.6
1,676,650	-		Sama_1384	0.77	+1.8
1,676,650	-		Sama_1384	0.77	+1.8
1,676,655	+		Sama_1384	0.78	-1.0
1,676,655	+		Sama_1384	0.78	-0.6
1,676,737	+				+1.8
1,676,803	+				-0.2
1,676,804	-				-0.2
1,676,820	-				-0.3
1,676,820	-				+0.2
1,676,894	+				+0.4
1,676,950	-		Sama_1385	0.14	+0.8
1,676,966	+		Sama_1385	0.17	-0.2
1,677,161	+		Sama_1385	0.55	+0.0
1,677,161	+		Sama_1385	0.55	+0.2
1,677,162	-		Sama_1385	0.55	-0.1
1,677,162	-		Sama_1385	0.55	-0.3
1,677,303	+		Sama_1385	0.83	-1.2
1,677,303	+		Sama_1385	0.83	+0.2
1,677,307	+		Sama_1385	0.84	-0.5
1,677,308	-		Sama_1385	0.84	-0.5
1,677,308	-		Sama_1385	0.84	-0.2
1,677,308	-		Sama_1385	0.84	-1.2
1,677,308	-		Sama_1385	0.84	+0.2
1,677,416	+				-2.0
1,677,417	-				-1.0
1,677,417	-				+1.0
1,677,418	+				+0.0
1,677,418	+				+0.6
1,677,418	+				-0.3
1,677,419	-				-0.5
1,677,419	-				+0.5
1,677,419	-				-0.7
1,677,419	-				-2.3
1,677,419	-				+0.2
1,677,456	+				-2.1
1,677,456	+				-0.8
1,677,474	+				+0.1
1,677,474	+				+0.1
1,677,474	+				+1.2
1,677,475	-				-0.3
1,677,475	-				+1.2
1,677,475	-				-2.2
1,677,476	+				-2.0
1,677,476	+				+0.8
1,677,476	+				-2.6
1,677,476	+				-0.8
1,677,476	+				+0.8
1,677,476	+				+0.3
1,677,476	+				+0.8
1,677,477	-				-0.8
1,677,477	-				-0.5
1,677,477	-				-0.0
1,677,477	-				-0.0
1,677,479	+				-0.2
1,677,480	-				+0.2
1,677,499	+				-0.2
1,677,500	-				+0.5
1,677,500	-				-1.3
1,677,505	+				+0.7
1,677,505	+				-0.2
1,677,590	+				-0.5
1,677,591	-				-1.0
1,677,701	+				+0.1
1,677,701	+				-1.2
1,677,702	-				+0.4
1,677,773	+		Sama_1386	0.13	+1.1