Strain Fitness in Shewanella amazonensis SB2B around Sama_1377

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
1,667,714	+		Sama_1376	0.47	-4.0
1,667,714	+		Sama_1376	0.47	-0.8
1,667,715	-		Sama_1376	0.47	-0.2
1,667,715	-		Sama_1376	0.47	+0.0
1,667,779	+		Sama_1376	0.51	+2.4
1,667,782	+		Sama_1376	0.52	+0.4
1,667,783	-		Sama_1376	0.52	-0.8
1,667,809	-		Sama_1376	0.53	-2.5
1,667,857	+		Sama_1376	0.57	+0.8
1,667,858	-		Sama_1376	0.57	-0.8
1,667,858	-		Sama_1376	0.57	-0.2
1,667,877	+		Sama_1376	0.58	+0.0
1,667,877	+		Sama_1376	0.58	-1.0
1,667,878	-		Sama_1376	0.58	+0.8
1,667,934	+		Sama_1376	0.62	-0.6
1,667,934	+		Sama_1376	0.62	+0.2
1,667,934	+		Sama_1376	0.62	-0.1
1,667,981	-		Sama_1376	0.65	-0.5
1,667,981	-		Sama_1376	0.65	-0.8
1,668,142	+		Sama_1376	0.76	+0.0
1,668,142	+		Sama_1376	0.76	-0.8
1,668,142	+		Sama_1376	0.76	+0.4
1,668,142	+		Sama_1376	0.76	+0.8
1,668,146	+		Sama_1376	0.76	-0.4
1,668,146	+		Sama_1376	0.76	-1.6
1,668,147	-		Sama_1376	0.76	+0.0
1,668,147	-		Sama_1376	0.76	-0.1
1,668,181	+		Sama_1376	0.78	-0.5
1,668,181	+		Sama_1376	0.78	+0.0
1,668,284	+		Sama_1376	0.85	-1.8
1,668,284	+		Sama_1376	0.85	-0.5
1,668,316	+		Sama_1376	0.87	+0.2
1,668,316	+		Sama_1376	0.87	-0.8
1,668,317	-		Sama_1376	0.87	-0.3
1,668,319	+		Sama_1376	0.87	-1.3
1,668,320	-		Sama_1376	0.88	-0.6
1,668,504	-				-1.5
1,668,521	+				+0.8
1,668,522	-				+0.3
1,668,522	-				-1.6
1,668,537	+				+0.0
1,668,566	+				-0.6
1,668,567	-				+0.2
1,668,567	-				-0.5
1,668,774	+		Sama_1377	0.14	+0.8
1,668,775	-		Sama_1377	0.14	-0.3
1,668,775	-		Sama_1377	0.14	-0.8
1,668,775	-		Sama_1377	0.14	-0.1
1,668,828	-		Sama_1377	0.18	+0.4
1,668,863	+		Sama_1377	0.21	+0.5
1,668,887	+		Sama_1377	0.23	-1.0
1,668,887	+		Sama_1377	0.23	-1.1
1,668,887	+		Sama_1377	0.23	-0.1
1,668,888	-		Sama_1377	0.24	-1.2
1,668,888	-		Sama_1377	0.24	-0.8
1,668,888	-		Sama_1377	0.24	-1.8
1,668,978	+		Sama_1377	0.31	-0.2
1,668,978	+		Sama_1377	0.31	-1.3
1,668,978	+		Sama_1377	0.31	-0.6
1,669,053	+		Sama_1377	0.38	+1.2
1,669,054	-		Sama_1377	0.38	-0.6
1,669,061	+		Sama_1377	0.39	-1.0
1,669,079	+		Sama_1377	0.40	+1.0
1,669,148	+		Sama_1377	0.46	-0.2
1,669,241	+		Sama_1377	0.54	+0.7
1,669,242	-		Sama_1377	0.54	+0.8
1,669,304	+		Sama_1377	0.59	-0.4
1,669,305	-		Sama_1377	0.60	-1.6
1,669,337	+		Sama_1377	0.62	-1.3
1,669,360	+		Sama_1377	0.64	+0.5
1,669,361	-		Sama_1377	0.64	-1.3
1,669,412	+		Sama_1377	0.69	+0.1
1,669,413	-		Sama_1377	0.69	-1.6
1,669,504	+		Sama_1377	0.77	-0.8
1,669,505	-		Sama_1377	0.77	-0.8
1,669,520	+		Sama_1377	0.78	-1.0
1,669,638	+		Sama_1377	0.88	-2.8
1,669,638	+		Sama_1377	0.88	+0.5
1,669,638	+		Sama_1377	0.88	-0.2
1,669,639	-		Sama_1377	0.88	-0.6
1,669,639	-		Sama_1377	0.88	-1.2
1,669,684	+				-1.0
1,669,818	+				+0.6
1,669,819	-				+1.0
1,669,847	-				-0.2
1,669,935	+		Sama_1378	0.14	+0.7
1,669,951	+		Sama_1378	0.16	-0.6
1,669,951	+		Sama_1378	0.16	-0.5
1,669,951	+		Sama_1378	0.16	-0.1
1,669,951	+		Sama_1378	0.16	+0.8
1,669,951	+		Sama_1378	0.16	+1.8
1,669,952	-		Sama_1378	0.16	-1.0
1,670,135	+		Sama_1378	0.40	-0.7
1,670,135	+		Sama_1378	0.40	+1.8
1,670,203	-		Sama_1378	0.49	+0.2
1,670,317	+		Sama_1378	0.63	-1.7
1,670,318	-		Sama_1378	0.64	+0.2
1,670,473	+		Sama_1378	0.84	+1.2
1,670,474	-		Sama_1378	0.84	-1.2
1,670,622	+				-0.8
1,670,622	+				-1.0
1,670,623	-				+0.2
1,670,623	-				+0.1
1,670,623	-				-1.5
1,670,655	-				+0.2
1,670,690	+				-0.3
1,670,690	+				+0.2
1,670,690	+				-1.9
1,670,690	+				+1.1
1,670,690	+				+0.0
1,670,690	+				-1.4
1,670,691	-				-1.0
1,670,691	-				-0.2