Strain Fitness in Shewanella amazonensis SB2B around Sama_1359

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
1,646,580	+				+1.3
1,646,580	+				-0.9
1,646,581	-				-0.1
1,646,581	-				+1.1
1,646,581	-				-0.2
1,646,615	+				-0.5
1,646,644	+				+1.8
1,646,648	+				-1.1
1,646,648	+				+0.4
1,646,648	+				-1.3
1,646,648	+				-1.3
1,646,649	-				-0.7
1,646,649	-				+0.3
1,646,649	-				-0.2
1,646,649	-				+0.3
1,646,649	-				-1.1
1,646,649	-				-1.9
1,646,649	-				-1.2
1,646,649	-				-0.3
1,646,649	-				-0.3
1,646,649	-				+0.4
1,646,649	-				+1.0
1,646,649	-				+0.3
1,646,655	-				-2.6
1,646,668	+				-0.2
1,646,668	+				+1.5
1,646,669	-				-0.3
1,646,748	-				-1.2
1,646,769	+		Sama_1358	0.11	-0.7
1,646,770	-		Sama_1358	0.12	-0.7
1,646,789	+		Sama_1358	0.14	+0.8
1,646,789	+		Sama_1358	0.14	+0.3
1,646,789	+		Sama_1358	0.14	+0.3
1,646,789	+		Sama_1358	0.14	-0.2
1,646,789	+		Sama_1358	0.14	-0.5
1,646,789	+		Sama_1358	0.14	+1.3
1,646,790	-		Sama_1358	0.14	-0.7
1,646,791	+		Sama_1358	0.14	-0.2
1,646,791	+		Sama_1358	0.14	+1.8
1,646,791	+		Sama_1358	0.14	-1.7
1,646,792	-		Sama_1358	0.14	+0.5
1,646,907	-		Sama_1358	0.27	-0.9
1,646,926	+		Sama_1358	0.29	-0.2
1,646,926	+		Sama_1358	0.29	+0.4
1,646,927	-		Sama_1358	0.29	+0.3
1,647,100	-		Sama_1358	0.49	+0.8
1,647,112	+		Sama_1358	0.50	+0.4
1,647,267	+		Sama_1358	0.67	+0.0
1,647,356	+		Sama_1358	0.77	+1.8
1,647,357	-		Sama_1358	0.77	-0.7
1,647,428	+		Sama_1358	0.85	+0.8
1,647,429	-		Sama_1358	0.86	-1.0
1,647,436	-		Sama_1358	0.86	+0.8
1,647,622	-				+1.0
1,647,622	-				+0.2
1,647,622	-				-0.7
1,647,689	-				-1.4
1,647,689	-				-0.2
1,647,689	-				+0.3
1,647,689	-				+1.3
1,647,695	+				-0.2
1,647,696	-				-1.5
1,647,696	-				-0.3
1,647,696	-				+0.6
1,647,805	-		Sama_1359	0.12	-0.7
1,647,861	-		Sama_1359	0.15	+0.3
1,647,907	+		Sama_1359	0.17	+0.5
1,647,908	-		Sama_1359	0.17	+0.3
1,647,908	-		Sama_1359	0.17	-0.9
1,647,945	+		Sama_1359	0.19	-1.0
1,647,946	-		Sama_1359	0.19	+1.4
1,647,973	+		Sama_1359	0.20	-0.3
1,647,973	+		Sama_1359	0.20	+1.5
1,647,973	+		Sama_1359	0.20	-1.3
1,647,973	+		Sama_1359	0.20	-1.0
1,647,993	+		Sama_1359	0.21	-2.3
1,647,993	+		Sama_1359	0.21	+0.3
1,648,007	+		Sama_1359	0.22	-0.4
1,648,094	-		Sama_1359	0.26	+0.3
1,648,168	+		Sama_1359	0.30	-1.3
1,648,332	+		Sama_1359	0.38	+0.0
1,648,369	-		Sama_1359	0.40	-0.7
1,648,433	+		Sama_1359	0.43	-1.3
1,648,434	-		Sama_1359	0.43	+2.8
1,648,545	+		Sama_1359	0.49	+0.0
1,648,696	+		Sama_1359	0.56	-1.0
1,648,738	-		Sama_1359	0.58	-0.2
1,648,914	-		Sama_1359	0.67	-0.1
1,648,914	-		Sama_1359	0.67	+0.6
1,648,914	-		Sama_1359	0.67	-0.7
1,648,977	-		Sama_1359	0.70	-0.2
1,648,996	-		Sama_1359	0.71	+0.6
1,649,050	-		Sama_1359	0.74	-1.0
1,649,073	+		Sama_1359	0.75	+1.8
1,649,073	+		Sama_1359	0.75	+1.3
1,649,073	+		Sama_1359	0.75	-0.1
1,649,112	+		Sama_1359	0.77	+1.8
1,649,112	+		Sama_1359	0.77	-0.7
1,649,113	-		Sama_1359	0.77	+0.4
1,649,337	-		Sama_1359	0.88	-0.8
1,649,382	+				-1.0
1,649,402	+				-0.2
1,649,402	+				+1.3
1,649,403	-				+0.1
1,649,487	-				+0.3
1,649,502	+				-2.4
1,649,503	-				-1.0
1,649,563	+				-0.0
1,649,564	-				-1.1
1,649,593	-				+0.3
1,649,729	+		Sama_1360	0.17	+0.5
1,649,729	+		Sama_1360	0.17	+0.3
1,649,730	-		Sama_1360	0.17	-0.2
1,649,752	+		Sama_1360	0.19	-1.3
1,649,752	+		Sama_1360	0.19	-2.3
1,649,752	+		Sama_1360	0.19	-1.0
1,649,797	+		Sama_1360	0.25	-0.6
1,649,852	+		Sama_1360	0.31	-1.9
1,649,852	+		Sama_1360	0.31	+0.6
1,649,852	+		Sama_1360	0.31	-1.3
1,649,853	-		Sama_1360	0.32	+0.3
1,649,853	-		Sama_1360	0.32	+1.8
1,649,853	-		Sama_1360	0.32	-1.9
1,649,902	+		Sama_1360	0.37	+2.4
1,649,902	+		Sama_1360	0.37	+0.4
1,649,903	-		Sama_1360	0.38	+0.8
1,649,904	+		Sama_1360	0.38	+0.3
1,649,904	+		Sama_1360	0.38	-0.0
1,649,905	-		Sama_1360	0.38	-0.7
1,649,905	-		Sama_1360	0.38	+0.3
1,649,943	+		Sama_1360	0.42	-1.2
1,649,951	-		Sama_1360	0.43	+0.6
1,650,071	+		Sama_1360	0.58	+0.7
1,650,226	+		Sama_1360	0.76	-1.0
1,650,226	+		Sama_1360	0.76	-0.2
1,650,226	+		Sama_1360	0.76	-2.4
1,650,226	+		Sama_1360	0.76	+0.4
1,650,226	+		Sama_1360	0.76	-0.2
1,650,227	-		Sama_1360	0.77	+0.8
1,650,227	-		Sama_1360	0.77	-0.7
1,650,236	+		Sama_1360	0.78	-0.2
1,650,236	+		Sama_1360	0.78	+1.1
1,650,289	+		Sama_1360	0.84	+0.8
1,650,332	+		Sama_1360	0.89	-1.3
1,650,333	-		Sama_1360	0.89	-0.2
1,650,343	-				+0.0
1,650,343	-				-1.5
1,650,358	+				-0.5
1,650,358	+				-1.1
1,650,359	-				-1.0
1,650,421	+				-1.7
1,650,421	+				+1.0
1,650,422	-				+0.3
1,650,433	+				+0.3
1,650,433	+				+1.0
1,650,434	-				-2.6
1,650,434	-				-0.7
1,650,434	-				-0.3
1,650,489	+				-1.2
1,650,504	+				+0.8
1,650,505	-				+0.1
1,650,565	+				+0.5
1,650,566	-				-1.2