Strain Fitness in Shewanella amazonensis SB2B around Sama_1069

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
1,294,168	-				+0.5
1,294,180	-				+0.2
1,294,195	+				-0.3
1,294,195	+				-1.8
1,294,239	-				+1.1
1,294,304	+				+1.1
1,294,387	+				+0.3
1,294,395	+				-0.4
1,294,395	+				-0.8
1,294,395	+				-1.2
1,294,395	+				-0.1
1,294,396	-				+1.9
1,294,396	-				+0.7
1,294,397	+				-0.0
1,294,397	+				-0.5
1,294,397	+				-2.2
1,294,397	+				+0.1
1,294,397	+				-0.1
1,294,397	+				-0.2
1,294,398	-				+0.2
1,294,419	-				-0.4
1,294,452	+				-0.5
1,294,452	+				+0.4
1,294,452	+				-0.8
1,294,452	+				+1.1
1,294,584	+		Sama_1068	0.11	-0.8
1,294,584	+		Sama_1068	0.11	-0.1
1,294,620	+		Sama_1068	0.17	+0.2
1,294,621	-		Sama_1068	0.17	+0.2
1,294,642	+		Sama_1068	0.20	-1.7
1,294,642	+		Sama_1068	0.20	-1.0
1,294,643	-		Sama_1068	0.20	-0.7
1,294,643	-		Sama_1068	0.20	+0.4
1,294,644	+		Sama_1068	0.21	-0.2
1,294,644	+		Sama_1068	0.21	-1.2
1,294,645	-		Sama_1068	0.21	+1.6
1,294,645	-		Sama_1068	0.21	-1.1
1,294,645	-		Sama_1068	0.21	-0.4
1,294,720	+		Sama_1068	0.33	+1.0
1,294,721	-		Sama_1068	0.34	-0.8
1,294,737	+		Sama_1068	0.36	-1.2
1,294,771	-		Sama_1068	0.42	+1.3
1,294,814	+		Sama_1068	0.49	+1.2
1,294,904	+		Sama_1068	0.64	+0.3
1,294,904	+		Sama_1068	0.64	-0.4
1,294,904	+		Sama_1068	0.64	+0.2
1,294,904	+		Sama_1068	0.64	+0.2
1,294,905	-		Sama_1068	0.64	+0.5
1,295,002	+		Sama_1068	0.81	+0.8
1,295,002	+		Sama_1068	0.81	-0.7
1,295,003	-		Sama_1068	0.81	-2.0
1,295,003	-		Sama_1068	0.81	+1.3
1,295,020	+		Sama_1068	0.84	+0.2
1,295,020	+		Sama_1068	0.84	-1.1
1,295,020	+		Sama_1068	0.84	-0.3
1,295,020	+		Sama_1068	0.84	-1.8
1,295,021	-		Sama_1068	0.84	+0.5
1,295,053	-		Sama_1068	0.89	-0.2
1,295,053	-		Sama_1068	0.89	+0.8
1,295,059	-				-0.5
1,295,139	+				-0.4
1,295,139	+				-0.6
1,295,211	-		Sama_1069	0.14	-0.3
1,295,288	-		Sama_1069	0.24	-0.4
1,295,288	-		Sama_1069	0.24	-0.7
1,295,319	-		Sama_1069	0.28	+0.1
1,295,421	+		Sama_1069	0.41	+0.2
1,295,421	+		Sama_1069	0.41	-0.7
1,295,501	+		Sama_1069	0.52	+0.3
1,295,501	+		Sama_1069	0.52	+1.3
1,295,633	+		Sama_1069	0.69	-0.8
1,295,678	+		Sama_1069	0.75	-0.7
1,295,678	+		Sama_1069	0.75	-1.4
1,295,765	+		Sama_1069	0.87	-0.5
1,295,765	+		Sama_1069	0.87	+0.6
1,295,765	+		Sama_1069	0.87	-0.1
1,295,766	-		Sama_1069	0.87	-1.9
1,295,790	+				-1.4
1,295,804	-				-0.7
1,295,810	+				+0.3
1,295,810	+				+0.9
1,295,810	+				-0.1
1,295,810	+				-0.8
1,295,811	-				+0.3
1,295,831	+				+0.3
1,295,831	+				-1.4
1,295,831	+				-0.3
1,295,937	-				-1.4
1,296,004	+		Sama_1070	0.12	-0.1
1,296,005	-		Sama_1070	0.12	-1.0
1,296,022	+		Sama_1070	0.14	+0.0
1,296,022	+		Sama_1070	0.14	+0.7
1,296,105	-		Sama_1070	0.24	-1.8
1,296,105	-		Sama_1070	0.24	+1.5
1,296,117	+		Sama_1070	0.25	+0.3
1,296,118	-		Sama_1070	0.25	+0.3
1,296,118	-		Sama_1070	0.25	+0.1
1,296,168	+		Sama_1070	0.31	-1.0
1,296,208	+		Sama_1070	0.36	-0.9
1,296,208	+		Sama_1070	0.36	+0.2
1,296,208	+		Sama_1070	0.36	-0.7
1,296,208	+		Sama_1070	0.36	-0.8
1,296,209	-		Sama_1070	0.36	+1.3
1,296,209	-		Sama_1070	0.36	+1.1
1,296,209	-		Sama_1070	0.36	-2.2
1,296,209	-		Sama_1070	0.36	-0.9
1,296,209	-		Sama_1070	0.36	-0.7
1,296,260	+		Sama_1070	0.42	-1.0
1,296,260	+		Sama_1070	0.42	-1.3
1,296,260	+		Sama_1070	0.42	+0.1
1,296,260	+		Sama_1070	0.42	+0.1
1,296,260	+		Sama_1070	0.42	+0.3
1,296,260	+		Sama_1070	0.42	-1.2
1,296,261	-		Sama_1070	0.42	-0.9
1,296,261	-		Sama_1070	0.42	-0.9
1,296,264	+		Sama_1070	0.42	+1.3
1,296,265	-		Sama_1070	0.43	-0.4
1,296,265	-		Sama_1070	0.43	+0.5
1,296,318	+		Sama_1070	0.49	-1.2
1,296,318	+		Sama_1070	0.49	+0.6
1,296,318	+		Sama_1070	0.49	-0.9
1,296,319	-		Sama_1070	0.49	+0.9
1,296,319	-		Sama_1070	0.49	+0.1
1,296,346	+		Sama_1070	0.52	-0.3
1,296,347	-		Sama_1070	0.52	+0.1
1,296,359	-		Sama_1070	0.54	+0.3
1,296,428	+		Sama_1070	0.62	-0.6
1,296,428	+		Sama_1070	0.62	-0.2
1,296,428	+		Sama_1070	0.62	-2.6
1,296,429	-		Sama_1070	0.62	-0.8
1,296,429	-		Sama_1070	0.62	+0.9
1,296,489	+		Sama_1070	0.69	-0.7
1,296,554	+		Sama_1070	0.77	+1.2
1,296,554	+		Sama_1070	0.77	+1.3
1,296,554	+		Sama_1070	0.77	+0.9
1,296,554	+		Sama_1070	0.77	+0.3
1,296,554	+		Sama_1070	0.77	+1.3
1,296,554	+		Sama_1070	0.77	+0.3
1,296,554	+		Sama_1070	0.77	+0.3
1,296,554	+		Sama_1070	0.77	+0.1
1,296,555	-		Sama_1070	0.77	+0.1
1,296,555	-		Sama_1070	0.77	-1.1
1,296,606	+		Sama_1070	0.83	-0.5
1,296,606	+		Sama_1070	0.83	+1.2
1,296,606	+		Sama_1070	0.83	+0.8
1,296,606	+		Sama_1070	0.83	+0.3
1,296,607	-		Sama_1070	0.83	+0.9
1,296,607	-		Sama_1070	0.83	-0.7
1,296,607	-		Sama_1070	0.83	+2.5
1,296,607	-		Sama_1070	0.83	-1.2
1,296,607	-		Sama_1070	0.83	-1.2
1,296,607	-		Sama_1070	0.83	-1.0
1,296,657	-		Sama_1070	0.89	-1.2
1,296,657	-		Sama_1070	0.89	-0.2
1,296,674	+				+0.2
1,296,674	+				-1.0
1,296,674	+				+0.6
1,296,674	+				-0.7
1,296,675	-				+0.9
1,296,680	+				-0.5
1,296,698	+				-1.2
1,296,762	+				-0.9
1,296,762	+				+0.5
1,296,762	+				-0.2
1,296,762	+				+0.6
1,296,762	+				-0.9
1,296,762	+				-0.4
1,296,763	-				-0.1
1,296,763	-				+2.4
1,296,763	-				-0.4
1,296,763	-				-0.4
1,296,763	-				+0.0
1,296,763	-				-0.1
1,296,763	-				-0.6
1,296,763	-				+0.0
1,296,781	+				+1.6
1,296,781	+				-0.1
1,296,782	-				+0.3
1,296,782	-				+0.2
1,296,782	-				+0.1
1,296,814	-				-1.2
1,296,814	-				-0.1
1,296,814	-				-0.4
1,296,838	-				+0.3
1,296,855	+				+0.6
1,296,856	-				-0.7
1,296,856	-				-0.4
1,296,856	-				-1.5
1,296,856	-				-0.1