Strain Fitness in Shewanella amazonensis SB2B around Sama_0982

Experiment: Carbenicillin 0.00195312 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.00195312 mg/ml
1,186,974	+		Sama_0981	0.32	-2.9
1,186,974	+		Sama_0981	0.32	+0.4
1,186,975	-		Sama_0981	0.32	+0.1
1,186,985	+		Sama_0981	0.32	-1.4
1,186,985	+		Sama_0981	0.32	-1.7
1,186,986	-		Sama_0981	0.32	-1.0
1,187,054	+		Sama_0981	0.37	-0.5
1,187,170	-		Sama_0981	0.46	+0.7
1,187,241	+		Sama_0981	0.51	-2.5
1,187,241	+		Sama_0981	0.51	-0.6
1,187,241	+		Sama_0981	0.51	+0.5
1,187,242	-		Sama_0981	0.51	+0.3
1,187,242	-		Sama_0981	0.51	-0.1
1,187,242	-		Sama_0981	0.51	-0.4
1,187,491	-		Sama_0981	0.69	+0.9
1,187,618	+		Sama_0981	0.79	-0.3
1,187,630	+		Sama_0981	0.80	-1.5
1,187,630	+		Sama_0981	0.80	-0.9
1,187,663	+		Sama_0981	0.82	-0.9
1,187,663	+		Sama_0981	0.82	-0.6
1,187,663	+		Sama_0981	0.82	+0.9
1,187,663	+		Sama_0981	0.82	-1.3
1,187,664	-		Sama_0981	0.82	+0.4
1,187,664	-		Sama_0981	0.82	+1.0
1,187,883	-				+0.1
1,188,031	-		Sama_0982	0.24	-0.7
1,188,031	-		Sama_0982	0.24	-0.1
1,188,031	-		Sama_0982	0.24	-2.1
1,188,041	+		Sama_0982	0.27	-0.7
1,188,042	-		Sama_0982	0.27	-1.1
1,188,042	-		Sama_0982	0.27	+0.3
1,188,056	+		Sama_0982	0.31	-0.6
1,188,056	+		Sama_0982	0.31	-1.0
1,188,057	-		Sama_0982	0.31	-0.9
1,188,102	-		Sama_0982	0.44	-0.6
1,188,273	-		Sama_0982	0.90	-1.7
1,188,296	+				-0.8
1,188,297	-				+0.2
1,188,297	-				+0.7
1,188,346	+				+0.5
1,188,352	+				-0.1
1,188,353	-				+1.2
1,188,353	-				-1.4
1,188,364	+				-0.9
1,188,365	-				-0.7
1,188,373	+				-1.0
1,188,393	+				-2.1
1,188,393	+				+0.2
1,188,393	+				-1.0
1,188,394	-				-1.5
1,188,403	-				-0.9
1,188,404	+				+0.1
1,188,410	-				-1.3
1,188,481	+				+0.2
1,188,481	+				+0.3
1,188,482	-				+0.3
1,188,483	+				+1.9
1,188,483	+				-0.1
1,188,483	+				-1.0
1,188,484	-				+2.9
1,188,484	-				+0.3
1,188,484	-				+0.6
1,188,511	-				-1.0
1,188,511	-				-0.5
1,188,522	+				+0.9
1,188,522	+				-0.5
1,188,522	+				+0.8
1,188,554	+				-1.2
1,188,577	-				-0.1
1,188,577	-				+0.5
1,188,665	+		Sama_0983	0.21	-0.6
1,188,666	-		Sama_0983	0.21	-0.3
1,188,666	-		Sama_0983	0.21	+0.9
1,188,776	+		Sama_0983	0.37	-0.7
1,188,776	+		Sama_0983	0.37	-1.0
1,188,777	-		Sama_0983	0.37	-1.5
1,188,777	-		Sama_0983	0.37	-0.4
1,188,777	-		Sama_0983	0.37	+0.1
1,188,810	+		Sama_0983	0.41	-0.4
1,188,810	+		Sama_0983	0.41	-0.2
1,188,810	+		Sama_0983	0.41	+1.1
1,188,810	+		Sama_0983	0.41	+0.7
1,188,810	+		Sama_0983	0.41	-0.1
1,188,811	-		Sama_0983	0.41	-0.1
1,188,811	-		Sama_0983	0.41	-0.9
1,188,811	-		Sama_0983	0.41	+1.5
1,188,811	-		Sama_0983	0.41	+0.7
1,188,833	+		Sama_0983	0.45	-0.2
1,188,872	+		Sama_0983	0.50	-0.7
1,188,908	-		Sama_0983	0.55	+0.3
1,188,951	+		Sama_0983	0.61	-1.2
1,188,951	+		Sama_0983	0.61	+1.1
1,188,951	+		Sama_0983	0.61	+0.1
1,188,951	+		Sama_0983	0.61	-0.6
1,188,951	+		Sama_0983	0.61	-0.7
1,188,951	+		Sama_0983	0.61	+0.2
1,188,951	+		Sama_0983	0.61	-0.0
1,188,952	-		Sama_0983	0.61	+0.9
1,188,952	-		Sama_0983	0.61	-0.1
1,188,952	-		Sama_0983	0.61	+2.9
1,188,952	-		Sama_0983	0.61	+0.3
1,188,952	-		Sama_0983	0.61	-1.5
1,188,952	-		Sama_0983	0.61	-0.2
1,188,952	-		Sama_0983	0.61	+0.4
1,189,078	+		Sama_0983	0.79	-0.2
1,189,078	+		Sama_0983	0.79	-1.9
1,189,079	-		Sama_0983	0.79	-0.8
1,189,079	-		Sama_0983	0.79	-0.1
1,189,079	-		Sama_0983	0.79	-0.4
1,189,121	+		Sama_0983	0.85	-0.1
1,189,121	+		Sama_0983	0.85	+0.2
1,189,121	+		Sama_0983	0.85	-0.5
1,189,126	+		Sama_0983	0.86	-1.4
1,189,126	+		Sama_0983	0.86	-0.5
1,189,127	-		Sama_0983	0.86	+1.6
1,189,154	+		Sama_0983	0.90	+0.0
1,189,197	+				-1.8
1,189,198	-				+0.1
1,189,198	-				-1.2
1,189,224	+				-0.7
1,189,224	+				-0.1