Strain Fitness in Shewanella oneidensis MR-1 around SO4423.1

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
4,612,071	+				-0.3
4,612,096	+		SO4420	0.11	+0.2
4,612,096	+		SO4420	0.11	+0.2
4,612,139	+		SO4420	0.20	-1.5
4,612,148	-		SO4420	0.21	-0.6
4,612,189	+		SO4420	0.29	+0.3
4,612,267	-		SO4420	0.45	+0.2
4,612,267	-		SO4420	0.45	-0.1
4,612,267	-		SO4420	0.45	+0.3
4,612,345	+		SO4420	0.60	-0.5
4,612,362	+		SO4420	0.63	-1.0
4,612,370	-		SO4420	0.65	-0.4
4,612,416	+		SO4420	0.74	-0.3
4,612,424	-		SO4420	0.75	+0.3
4,612,576	-		SO4421	0.12	+0.0
4,612,620	-		SO4421	0.36	-0.4
4,612,655	-		SO4421	0.55	-0.3
4,612,674	-		SO4421	0.66	-0.1
4,612,787	-				+0.7
4,612,886	-				+0.1
4,613,076	+				-0.7
4,613,083	+				-0.4
4,613,084	-				+1.9
4,613,084	-				+0.9
4,613,086	-				-1.0
4,613,091	-				-1.1
4,613,353	+		SO4423.1	0.31	-0.9
4,613,402	-		SO4423.1	0.36	-1.6
4,613,421	-		SO4423.1	0.38	-1.0
4,613,566	+		SO4423.1	0.53	-0.4
4,613,566	+		SO4423.1	0.53	-1.7
4,613,627	+		SO4423.1	0.59	+0.1
4,613,770	+		SO4423.1	0.73	-1.8
4,613,773	-		SO4423.1	0.73	-0.7
4,613,785	-		SO4423.1	0.74	-1.7
4,613,901	+		SO4423.1	0.86	-1.2
4,614,077	+				-0.6
4,614,101	+				-1.2
4,614,109	+				-1.4
4,614,223	-		SO_4422	0.13	-0.1
4,614,239	-		SO_4422	0.14	-0.5
4,614,350	+		SO_4422	0.24	-0.1
4,614,386	-		SO_4422	0.27	-0.4
4,614,388	+		SO_4422	0.27	+0.2
4,614,516	+		SO_4422	0.39	-0.7
4,614,605	+		SO_4422	0.46	-1.8
4,614,620	-		SO_4422	0.48	-1.0
4,614,719	+		SO_4422	0.56	+1.0
4,614,719	+		SO_4422	0.56	+0.3
4,614,719	+		SO_4422	0.56	-0.5
4,614,719	+		SO_4422	0.56	-0.5
4,614,727	-		SO_4422	0.57	-1.9
4,614,727	-		SO_4422	0.57	-1.7
4,614,727	-		SO_4422	0.57	-2.8
4,614,727	-		SO_4422	0.57	-1.4
4,614,727	-		SO_4422	0.57	-0.6
4,614,727	-		SO_4422	0.57	-1.1
4,614,727	-		SO_4422	0.57	+0.1
4,614,780	+		SO_4422	0.62	-1.6
4,614,882	-		SO_4422	0.71	-0.6
4,614,955	+		SO_4422	0.77	+0.3
4,614,978	+		SO_4422	0.79	-0.3
4,614,986	-		SO_4422	0.80	-1.3