Strain Fitness in Shewanella oneidensis MR-1 around SO4413

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
4,605,657	+				+0.1
4,605,657	+				-0.8
4,605,657	+				+0.7
4,605,659	-				+0.5
4,605,762	+				-0.3
4,605,840	+				+0.2
4,605,860	+				-1.0
4,605,860	+				+0.0
4,605,860	+				-0.1
4,605,860	+				-0.2
4,605,860	+				-0.5
4,605,860	+				+0.6
4,605,860	+				+0.3
4,605,860	+				+0.0
4,605,868	-				-0.1
4,605,868	-				+0.5
4,605,868	-				-0.4
4,605,897	+				-0.7
4,605,924	+				-1.3
4,605,932	-				-0.0
4,605,940	+				-0.7
4,605,955	+				-0.2
4,606,010	+				+0.6
4,606,018	-				+0.7
4,606,059	-				+0.2
4,606,060	+				-0.3
4,606,135	+				-0.8
4,606,162	+				+0.5
4,606,177	+		SO4412	0.11	-0.2
4,606,177	+		SO4412	0.11	+0.5
4,606,177	+		SO4412	0.11	-0.6
4,606,177	+		SO4412	0.11	+0.4
4,606,185	+		SO4412	0.14	-0.8
4,606,185	-		SO4412	0.14	+0.6
4,606,185	-		SO4412	0.14	+0.1
4,606,185	-		SO4412	0.14	-0.9
4,606,199	+		SO4412	0.18	+0.1
4,606,199	+		SO4412	0.18	-0.4
4,606,199	+		SO4412	0.18	+1.3
4,606,201	-		SO4412	0.19	-0.7
4,606,222	+		SO4412	0.25	-0.3
4,606,224	-		SO4412	0.26	-0.3
4,606,244	+		SO4412	0.32	-0.4
4,606,267	+		SO4412	0.39	-1.6
4,606,267	+		SO4412	0.39	-0.2
4,606,275	-		SO4412	0.41	+0.4
4,606,322	-		SO4412	0.56	-0.3
4,606,342	+		SO4412	0.62	-1.4
4,606,350	-		SO4412	0.65	+1.3
4,606,380	-		SO4412	0.74	-0.7
4,606,499	+				+0.9
4,606,528	-				+0.3
4,606,549	-				-0.6
4,606,685	+				-0.0
4,606,685	+				+0.5
4,606,685	+				-0.5
4,606,809	-		SO4413	0.18	+1.0
4,606,827	+		SO4413	0.19	-1.2
4,606,845	-		SO4413	0.21	-0.2
4,606,855	-		SO4413	0.22	+0.6
4,606,855	-		SO4413	0.22	-0.4
4,606,917	+		SO4413	0.27	-0.1
4,606,963	+		SO4413	0.31	-1.1
4,607,108	-		SO4413	0.44	+0.3
4,607,180	+		SO4413	0.50	-1.1
4,607,252	+		SO4413	0.57	-0.2
4,607,293	+		SO4413	0.60	+0.9
4,607,298	+		SO4413	0.61	-0.2
4,607,330	+		SO4413	0.64	-1.1
4,607,330	+		SO4413	0.64	-0.1
4,607,338	-		SO4413	0.64	+0.4
4,607,421	+		SO4413	0.72	-0.1
4,607,603	-		SO4413	0.88	-0.3
4,607,604	-		SO4413	0.88	-1.3
4,607,608	+		SO4413	0.88	-3.0
4,607,904	+		SO4414	0.13	-0.1
4,607,912	-		SO4414	0.14	-0.8
4,607,914	+		SO4414	0.14	-1.1
4,607,927	+		SO4414	0.15	-0.0
4,607,941	+		SO4414	0.16	+0.6
4,607,962	+		SO4414	0.18	-0.7
4,608,011	-		SO4414	0.22	+0.3
4,608,030	+		SO4414	0.24	-0.4
4,608,033	-		SO4414	0.24	+0.5
4,608,033	-		SO4414	0.24	-0.7
4,608,040	+		SO4414	0.25	-1.0
4,608,040	+		SO4414	0.25	+2.3
4,608,172	+		SO4414	0.36	-1.5
4,608,206	-		SO4414	0.39	+0.0
4,608,240	+		SO4414	0.42	-1.6
4,608,240	+		SO4414	0.42	+1.3
4,608,248	-		SO4414	0.42	-0.4
4,608,411	-		SO4414	0.56	-1.0
4,608,452	-		SO4414	0.60	-0.0
4,608,496	+		SO4414	0.63	-0.2
4,608,529	+		SO4414	0.66	-0.3
4,608,568	+		SO4414	0.69	+0.1
4,608,591	-		SO4414	0.71	-0.4
4,608,608	+		SO4414	0.73	+0.8
4,608,618	+		SO4414	0.74	-0.3
4,608,671	+		SO4414	0.78	+0.3
4,608,671	+		SO4414	0.78	-0.1
4,608,671	+		SO4414	0.78	-0.8
4,608,679	-		SO4414	0.79	-0.3
4,608,679	-		SO4414	0.79	-1.5
4,608,679	-		SO4414	0.79	+0.0
4,608,679	-		SO4414	0.79	-1.1
4,608,679	-		SO4414	0.79	-0.7
4,608,694	-		SO4414	0.80	+2.0
4,608,720	-		SO4414	0.82	-0.1
4,608,728	+		SO4414	0.83	-0.5