Strain Fitness in Shewanella oneidensis MR-1 around SO4320

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
4,506,155	+		SO4319	0.34	-0.4
4,506,203	+		SO4319	0.37	-0.4
4,506,211	-		SO4319	0.38	-0.2
4,506,213	+		SO4319	0.38	-0.6
4,506,217	+		SO4319	0.38	-0.4
4,506,225	-		SO4319	0.38	+0.1
4,506,226	-		SO4319	0.39	-0.7
4,506,247	+		SO4319	0.40	-0.3
4,506,263	+		SO4319	0.41	-0.5
4,506,431	+		SO4319	0.53	-0.3
4,506,431	+		SO4319	0.53	-0.3
4,506,431	+		SO4319	0.53	+0.5
4,506,441	+		SO4319	0.53	-0.3
4,506,441	-		SO4319	0.53	+0.2
4,506,464	+		SO4319	0.55	+0.4
4,506,510	+		SO4319	0.58	-0.1
4,506,510	+		SO4319	0.58	+1.5
4,506,510	+		SO4319	0.58	-0.4
4,506,520	+		SO4319	0.59	+0.6
4,506,615	-		SO4319	0.65	-0.5
4,506,636	-		SO4319	0.67	+0.1
4,506,636	-		SO4319	0.67	+1.4
4,506,641	-		SO4319	0.67	+0.4
4,506,690	+		SO4319	0.70	-0.2
4,506,690	+		SO4319	0.70	+0.5
4,506,690	+		SO4319	0.70	+0.6
4,506,690	+		SO4319	0.70	+0.3
4,506,690	+		SO4319	0.70	-0.2
4,506,690	+		SO4319	0.70	+0.4
4,506,698	-		SO4319	0.71	-0.1
4,506,698	-		SO4319	0.71	+0.5
4,506,700	+		SO4319	0.71	+0.3
4,506,708	-		SO4319	0.72	-0.2
4,506,708	-		SO4319	0.72	-0.2
4,506,713	+		SO4319	0.72	+0.5
4,506,722	+		SO4319	0.73	+0.1
4,506,744	-		SO4319	0.74	-0.3
4,506,745	-		SO4319	0.74	-0.7
4,506,826	+		SO4319	0.80	-1.3
4,506,834	-		SO4319	0.80	+0.5
4,506,853	+		SO4319	0.82	+0.0
4,506,853	+		SO4319	0.82	-0.9
4,506,853	+		SO4319	0.82	-0.1
4,506,861	-		SO4319	0.82	+0.3
4,506,887	-		SO4319	0.84	-0.2
4,506,954	+		SO4319	0.89	-0.1
4,507,090	+				-0.7
4,507,113	+				+0.5
4,507,121	-				+0.4
4,507,122	-				+0.8
4,507,132	-				+0.1
4,507,172	-				-0.4
4,507,239	-				-0.2
4,507,245	-				+0.6
4,507,245	-				+0.9
4,507,362	-	aggA	SO4320	0.15	+1.8
4,507,371	+	aggA	SO4320	0.16	+0.1
4,507,460	-	aggA	SO4320	0.22	+0.3
4,507,460	-	aggA	SO4320	0.22	-0.8
4,507,557	-	aggA	SO4320	0.29	-0.0
4,507,599	-	aggA	SO4320	0.32	+0.9
4,507,713	+	aggA	SO4320	0.40	-1.0
4,507,771	-	aggA	SO4320	0.44	+1.1
4,507,843	-	aggA	SO4320	0.49	-1.2
4,507,862	-	aggA	SO4320	0.51	-0.2
4,507,911	-	aggA	SO4320	0.54	+0.0
4,507,942	-	aggA	SO4320	0.56	+1.2
4,508,152	+	aggA	SO4320	0.71	-0.1
4,508,291	+	aggA	SO4320	0.81	+1.6
4,508,304	-	aggA	SO4320	0.82	-0.0
4,508,353	+	aggA	SO4320	0.85	+0.7
4,508,374	-	aggA	SO4320	0.87	-0.3
4,508,439	+				+0.2
4,508,484	+				-0.1
4,508,508	-				-0.8
4,508,512	-				+0.6
4,508,517	+				-0.3
4,508,583	+				-0.1
4,508,591	-				+0.7
4,508,679	-		SO4321	0.20	-0.2
4,508,686	+		SO4321	0.21	-0.1
4,508,741	-		SO4321	0.30	-0.5
4,508,758	-		SO4321	0.33	+1.1
4,508,810	+		SO4321	0.42	+0.5
4,508,828	-		SO4321	0.45	+0.0
4,508,877	+		SO4321	0.53	+0.1
4,508,877	+		SO4321	0.53	-0.6
4,508,923	-		SO4321	0.60	-0.7
4,508,990	+		SO4321	0.71	-0.2
4,509,014	+		SO4321	0.75	+0.3
4,509,020	+		SO4321	0.76	-0.2
4,509,022	-		SO4321	0.77	+0.3
4,509,034	-		SO4321	0.79	-0.7
4,509,044	-		SO4321	0.80	-0.0
4,509,078	+		SO4321	0.86	+0.2
4,509,079	+		SO4321	0.86	-0.3
4,509,087	-		SO4321	0.87	-0.1
4,509,097	+		SO4321	0.89	-0.2
4,509,098	-		SO4321	0.89	+0.1
4,509,165	+				+0.9
4,509,262	-		SO4322	0.11	-0.5
4,509,264	+		SO4322	0.12	-0.2
4,509,344	+		SO4322	0.23	-0.4
4,509,363	+		SO4322	0.26	-0.6
4,509,481	+		SO4322	0.42	-0.7
4,509,489	-		SO4322	0.43	-0.1
4,509,489	-		SO4322	0.43	+0.2
4,509,558	-		SO4322	0.53	-0.7