Strain Fitness in Shewanella oneidensis MR-1 around SO4029

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
4,182,379	+				-0.3
4,183,265	-				-0.2
4,183,265	-				-1.8
4,183,265	-				-0.1
4,183,265	-				-1.4
4,183,331	+				-1.4
4,183,426	+		SO4029	0.13	-1.9
4,183,434	-		SO4029	0.14	-0.5
4,183,434	-		SO4029	0.14	-0.5
4,183,651	+		SO4029	0.30	-0.5
4,183,702	+		SO4029	0.33	-2.0
4,183,920	-		SO4029	0.49	-1.1
4,183,924	+		SO4029	0.50	+0.2
4,184,019	+		SO4029	0.57	-0.7
4,184,033	-		SO4029	0.58	-1.3
4,184,131	-		SO4029	0.65	+0.2
4,184,277	+		SO4029	0.75	-2.4
4,184,426	-		SO4029	0.86	-2.2
4,184,549	-				-1.8
4,184,642	-				-0.8
4,184,649	+				-0.5
4,184,659	+				-0.3
4,184,659	+				-0.2
4,184,667	-				-0.5
4,184,760	-				-0.8
4,184,840	+				+0.5
4,184,848	-				-0.8
4,184,891	-				-1.4
4,184,898	+				-0.6
4,185,074	+				+0.7
4,185,082	-				+0.1
4,185,138	+				-0.3
4,185,148	-				+0.7
4,185,159	+				-1.0
4,185,175	+				+0.3
4,185,175	+				-2.3
4,185,204	-				-0.7
4,185,247	-				-0.1
4,185,288	+				+0.4
4,185,324	-	uvrA	SO4030	0.11	-0.1
4,185,345	-	uvrA	SO4030	0.12	-0.3
4,185,390	-	uvrA	SO4030	0.13	-0.6
4,185,492	-	uvrA	SO4030	0.17	+0.1
4,185,523	+	uvrA	SO4030	0.18	-0.1
4,185,530	-	uvrA	SO4030	0.18	-0.4
4,185,530	-	uvrA	SO4030	0.18	+0.4
4,185,530	-	uvrA	SO4030	0.18	-1.0
4,185,531	-	uvrA	SO4030	0.18	+1.7
4,185,531	-	uvrA	SO4030	0.18	-0.5
4,185,531	-	uvrA	SO4030	0.18	-0.4
4,185,534	+	uvrA	SO4030	0.18	-0.2
4,185,578	+	uvrA	SO4030	0.20	-0.0