Strain Fitness in Shewanella oneidensis MR-1 around SO3913

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
4,057,208	-		SO3912	0.30	+1.1
4,057,213	+		SO3912	0.31	-0.7
4,057,213	+		SO3912	0.31	-0.7
4,057,213	+		SO3912	0.31	+0.4
4,057,313	-		SO3912	0.40	-0.1
4,057,313	-		SO3912	0.40	+0.3
4,057,371	-		SO3912	0.46	+0.7
4,057,423	-		SO3912	0.51	-0.1
4,057,513	-		SO3912	0.60	-0.3
4,057,549	+		SO3912	0.64	+1.0
4,057,554	+		SO3912	0.64	-1.4
4,057,613	-		SO3912	0.70	-0.3
4,057,654	+		SO3912	0.74	+1.1
4,057,681	+		SO3912	0.77	-0.3
4,057,681	+		SO3912	0.77	-0.1
4,057,702	+		SO3912	0.79	-1.4
4,057,753	+		SO3912	0.84	+0.4
4,057,794	+		SO3912	0.88	-1.9
4,057,855	+				+0.5
4,058,037	+				+0.5
4,058,084	-				+1.3
4,058,084	-				-0.7
4,058,086	-				-3.4
4,058,097	+				-1.4
4,058,132	-				-0.2
4,058,142	+				+0.5
4,058,266	+		SO3913	0.18	-0.6
4,058,278	+		SO3913	0.20	-0.3
4,058,344	-		SO3913	0.30	-1.4
4,058,371	+		SO3913	0.34	-0.1
4,058,391	+		SO3913	0.37	-0.4
4,058,391	+		SO3913	0.37	-1.1
4,058,391	+		SO3913	0.37	-0.1
4,058,399	-		SO3913	0.38	-1.5
4,058,399	-		SO3913	0.38	-0.3
4,058,576	+		SO3913	0.64	-0.3
4,058,584	-		SO3913	0.65	-0.9
4,058,598	-		SO3913	0.67	-0.6
4,058,763	+				+0.2
4,058,853	-				+0.6
4,058,856	+				-1.4
4,058,856	+				-0.7
4,058,856	+				-0.1
4,058,856	+				-0.6
4,058,857	+				+1.3
4,058,864	-				+0.1
4,058,864	-				-0.4
4,058,864	-				-1.3
4,058,891	+				+1.7
4,058,891	+				-2.1
4,058,899	-				-1.1
4,058,899	-				-1.7
4,058,899	-				-0.2
4,058,899	-				-0.0
4,058,965	-				-1.2
4,058,965	-				-1.3
4,059,021	-				-1.6
4,059,064	+				-1.9
4,059,088	-				-1.7
4,059,166	-		SO3914	0.12	-0.5
4,059,169	+		SO3914	0.13	-2.2
4,059,196	-		SO3914	0.14	-1.6
4,059,228	-		SO3914	0.15	-0.3
4,059,249	-		SO3914	0.16	-1.2
4,059,292	-		SO3914	0.18	-1.1
4,059,371	-		SO3914	0.22	-2.0
4,059,430	-		SO3914	0.24	-0.5
4,059,513	-		SO3914	0.28	-1.1
4,059,559	+		SO3914	0.30	-0.9
4,059,569	+		SO3914	0.31	-0.5
4,059,569	+		SO3914	0.31	-1.5
4,059,593	+		SO3914	0.32	-2.0
4,059,593	+		SO3914	0.32	+0.3
4,059,593	+		SO3914	0.32	-0.4
4,059,601	-		SO3914	0.32	-1.1
4,059,601	-		SO3914	0.32	-3.0
4,059,660	+		SO3914	0.35	-0.1
4,059,684	-		SO3914	0.36	-0.4
4,059,731	-		SO3914	0.38	-1.1
4,059,811	-		SO3914	0.42	-1.7