Strain Fitness in Shewanella oneidensis MR-1 around SO3640

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
3,798,909	-	ksgA	SO3639	0.32	+0.7
3,799,193	-	ksgA	SO3639	0.67	-1.1
3,799,236	+	ksgA	SO3639	0.73	-1.3
3,799,290	-	ksgA	SO3639	0.79	+0.1
3,799,290	-	ksgA	SO3639	0.79	+0.2
3,799,458	-				-1.3
3,799,458	-				-1.0
3,799,528	-				-1.4
3,799,528	-				-0.9
3,799,695	+	apaG	SO3640	0.49	-2.1
3,799,702	-	apaG	SO3640	0.51	-0.5
3,799,710	-	apaG	SO3640	0.53	-1.8
3,799,935	+				+0.4
3,799,935	+				+0.8
3,799,943	-				-1.6
3,799,943	-				+0.4
3,799,943	-				+0.0
3,800,067	-	apaH	SO3641	0.19	-0.5
3,800,212	+	apaH	SO3641	0.36	-0.8
3,800,212	+	apaH	SO3641	0.36	-0.3
3,800,220	-	apaH	SO3641	0.37	-0.2
3,800,386	+	apaH	SO3641	0.58	-0.8
3,800,389	+	apaH	SO3641	0.58	-1.4
3,800,406	-	apaH	SO3641	0.60	+0.2
3,800,418	+	apaH	SO3641	0.61	-0.6
3,800,418	+	apaH	SO3641	0.61	+0.6
3,800,418	+	apaH	SO3641	0.61	+0.1
3,800,418	+	apaH	SO3641	0.61	+0.9
3,800,426	-	apaH	SO3641	0.62	+0.7
3,800,426	-	apaH	SO3641	0.62	-0.5
3,800,426	-	apaH	SO3641	0.62	-0.0
3,800,517	-	apaH	SO3641	0.73	-0.1
3,800,837	+				-0.6
3,800,868	+				-1.5