Strain Fitness in Shewanella oneidensis MR-1 around SO3493

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
3,642,119	-	mexF	SO3492	0.69	+1.2
3,642,119	-	mexF	SO3492	0.69	+0.5
3,642,119	-	mexF	SO3492	0.69	+0.7
3,642,163	-	mexF	SO3492	0.70	+0.8
3,642,221	+	mexF	SO3492	0.72	+0.4
3,642,281	-	mexF	SO3492	0.74	+0.2
3,642,281	-	mexF	SO3492	0.74	+0.1
3,642,281	-	mexF	SO3492	0.74	+0.9
3,642,281	-	mexF	SO3492	0.74	+0.7
3,642,294	+	mexF	SO3492	0.74	-0.2
3,642,398	-	mexF	SO3492	0.78	+0.2
3,642,433	-	mexF	SO3492	0.79	+1.7
3,642,438	-	mexF	SO3492	0.79	+0.6
3,642,446	-	mexF	SO3492	0.79	-0.1
3,642,508	+	mexF	SO3492	0.81	+0.8
3,642,590	+	mexF	SO3492	0.84	+0.6
3,642,738	-	mexF	SO3492	0.88	+1.0
3,642,775	+	mexF	SO3492	0.90	+0.0
3,642,775	+	mexF	SO3492	0.90	+0.2
3,642,783	-	mexF	SO3492	0.90	+0.5
3,642,783	-	mexF	SO3492	0.90	+0.7
3,642,799	+				+0.3
3,642,799	+				+0.4
3,642,807	-				+0.5
3,642,807	-				+0.4
3,642,823	+				+0.5
3,642,824	+				+0.1
3,642,837	-				+0.4
3,642,837	-				+0.8
3,643,142	+				+0.2
3,643,268	+	mexE	SO3493	0.10	-1.3
3,643,270	+	mexE	SO3493	0.11	+0.7
3,643,356	+	mexE	SO3493	0.17	-0.3
3,643,542	+	mexE	SO3493	0.30	-0.1
3,643,592	-	mexE	SO3493	0.33	+1.0
3,643,616	-	mexE	SO3493	0.35	-0.4
3,643,773	-	mexE	SO3493	0.46	+0.5
3,643,773	-	mexE	SO3493	0.46	+0.2
3,643,803	-	mexE	SO3493	0.48	-0.8
3,643,814	+	mexE	SO3493	0.49	+0.4
3,643,860	+	mexE	SO3493	0.52	+0.2
3,643,909	-	mexE	SO3493	0.55	-1.2
3,643,952	-	mexE	SO3493	0.58	+1.3
3,644,132	+	mexE	SO3493	0.71	+0.3
3,644,221	+	mexE	SO3493	0.77	+1.7
3,644,312	-	mexE	SO3493	0.83	+1.1
3,644,612	+				-0.6
3,644,618	-				-1.0
3,644,635	+				-0.5
3,644,668	+				-1.2
3,644,674	+				-0.3
3,644,679	+				-0.5
3,644,711	+				-2.9
3,644,848	-		SO3494	0.23	-0.3
3,644,858	-		SO3494	0.24	-1.7
3,645,398	-				-1.1
3,645,408	-				+0.6
3,645,415	-				-0.7
3,645,415	-				+0.8
3,645,497	+		SO3495	0.13	-0.2
3,645,511	-		SO3495	0.16	-0.5
3,645,513	-		SO3495	0.17	+0.3
3,645,513	-		SO3495	0.17	+0.8
3,645,513	-		SO3495	0.17	-0.2