Strain Fitness in Shewanella oneidensis MR-1 around SO3351

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
3,495,005	+	pilU	SO3350	0.12	-0.0
3,495,114	+	pilU	SO3350	0.22	-0.7
3,495,114	+	pilU	SO3350	0.22	+0.3
3,495,166	-	pilU	SO3350	0.27	-0.4
3,495,305	+	pilU	SO3350	0.39	+0.8
3,495,305	+	pilU	SO3350	0.39	+0.2
3,495,308	-	pilU	SO3350	0.39	+0.2
3,495,313	-	pilU	SO3350	0.40	+0.2
3,495,329	+	pilU	SO3350	0.41	+0.4
3,495,412	+	pilU	SO3350	0.49	-0.0
3,495,412	+	pilU	SO3350	0.49	-1.2
3,495,412	+	pilU	SO3350	0.49	-0.9
3,495,420	-	pilU	SO3350	0.50	+0.4
3,495,420	-	pilU	SO3350	0.50	+0.3
3,495,430	-	pilU	SO3350	0.50	+1.5
3,495,451	-	pilU	SO3350	0.52	+0.6
3,495,481	+	pilU	SO3350	0.55	+1.5
3,495,566	-	pilU	SO3350	0.63	-0.3
3,495,601	+	pilU	SO3350	0.66	-0.2
3,495,659	-	pilU	SO3350	0.71	-0.1
3,495,720	+	pilU	SO3350	0.76	+0.2
3,495,859	-	pilU	SO3350	0.89	+0.1
3,495,931	+				+0.8
3,495,931	+				-0.7
3,496,071	-				-0.3
3,496,077	+				-0.5
3,496,077	+				-0.6
3,496,077	+				-0.7
3,496,077	+				-0.5
3,496,077	+				+0.0
3,496,077	+				+0.2
3,496,077	+				-0.7
3,496,085	-				+0.6
3,496,085	-				-0.6
3,496,085	-				-0.4
3,496,085	-				-1.1
3,496,085	-				-1.0
3,496,094	+				-1.0
3,496,158	-	pilT	SO3351	0.16	-0.1
3,496,375	-	pilT	SO3351	0.37	-1.5
3,496,400	+	pilT	SO3351	0.39	-0.4
3,496,441	-	pilT	SO3351	0.43	-1.4
3,496,489	+	pilT	SO3351	0.48	-1.4
3,496,566	-	pilT	SO3351	0.55	-0.4
3,496,621	-	pilT	SO3351	0.61	+0.4
3,496,757	-	pilT	SO3351	0.74	-0.4
3,496,804	-	pilT	SO3351	0.78	-1.4
3,496,806	+	pilT	SO3351	0.79	-2.0
3,496,875	+	pilT	SO3351	0.85	-2.1
3,496,878	-	pilT	SO3351	0.85	-0.2
3,496,882	+	pilT	SO3351	0.86	-2.2
3,496,890	-	pilT	SO3351	0.87	-1.0
3,496,890	-	pilT	SO3351	0.87	-0.9
3,496,904	+	pilT	SO3351	0.88	-1.0
3,496,972	+				+0.3
3,496,972	+				-1.0
3,497,099	+				+0.1
3,497,099	+				+1.6
3,497,099	+				-0.6
3,497,107	-				-0.4
3,497,107	-				+0.8
3,497,353	-		SO3352	0.40	+2.6
3,497,545	-		SO3352	0.67	-0.9
3,497,545	-		SO3352	0.67	+2.6
3,497,545	-		SO3352	0.67	+0.1
3,497,615	-		SO3352	0.77	-0.8
3,497,793	+				+0.6
3,497,954	+				-1.2
3,497,974	+				+0.4
3,497,974	+				-0.1
3,497,974	+				+0.2
3,497,974	+				+0.6
3,497,982	-				-0.1