Strain Fitness in Shewanella oneidensis MR-1 around SO3278

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
3,416,866	-				-0.1
3,416,892	+				-0.2
3,416,898	+				+0.6
3,416,898	-				+0.6
3,416,907	-				+1.4
3,416,926	-				+0.1
3,416,949	+				+2.3
3,417,102	-				+0.1
3,417,104	-				-0.7
3,417,120	+				-0.2
3,417,153	+		SO3277	0.15	-0.9
3,417,159	+		SO3277	0.16	-0.2
3,417,161	-		SO3277	0.16	+0.5
3,417,204	+		SO3277	0.24	+0.2
3,417,207	+		SO3277	0.24	-0.8
3,417,207	+		SO3277	0.24	-1.7
3,417,546	+		SO3277	0.84	+0.0
3,417,594	-				-2.2
3,417,661	+				-0.3
3,417,674	+				-0.8
3,417,750	-				+1.4
3,417,837	-				+0.3
3,417,842	-				-0.6
3,417,896	-				-0.1
3,417,967	-		SO3278	0.12	+0.6
3,417,967	-		SO3278	0.12	+1.2
3,417,995	+		SO3278	0.15	+1.4
3,418,038	+		SO3278	0.19	+1.8
3,418,046	-		SO3278	0.19	-0.3
3,418,046	-		SO3278	0.19	+0.3
3,418,046	-		SO3278	0.19	+0.2
3,418,140	-		SO3278	0.28	+0.1
3,418,182	-		SO3278	0.32	+1.1
3,418,208	+		SO3278	0.34	-0.1
3,418,261	-		SO3278	0.39	-0.6
3,418,287	+		SO3278	0.41	+0.4
3,418,441	-		SO3278	0.55	-0.4
3,418,507	-		SO3278	0.60	-0.3
3,418,509	-		SO3278	0.61	-0.1
3,418,601	+		SO3278	0.69	+0.6
3,418,784	+		SO3278	0.85	+0.3
3,418,795	+		SO3278	0.86	-0.3
3,418,825	+		SO3278	0.89	+1.1
3,418,833	-		SO3278	0.89	+0.4
3,418,833	-		SO3278	0.89	+0.8
3,418,840	+				-0.0
3,418,840	+				-0.1
3,418,840	+				+0.4
3,418,848	-				-0.1
3,418,848	-				-0.2
3,418,905	+				+0.4
3,418,991	+				+1.0
3,418,999	-				-1.3
3,419,037	-				+1.4
3,419,264	+		SO3279	0.10	-0.5
3,419,264	+		SO3279	0.10	+0.3
3,419,272	-		SO3279	0.10	-0.9
3,419,397	+		SO3279	0.14	+0.4
3,419,699	+		SO3279	0.24	-1.4
3,419,702	-		SO3279	0.24	+0.4
3,419,944	-		SO3279	0.32	-0.0