Strain Fitness in Shewanella oneidensis MR-1 around SO2757

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
2,877,908	-				-0.2
2,878,044	+		SO_2756	0.30	-1.1
2,878,054	+		SO_2756	0.32	+0.2
2,878,085	+		SO_2756	0.37	+0.4
2,878,120	+		SO_2756	0.43	-0.4
2,878,184	-		SO_2756	0.53	-0.4
2,878,280	+		SO_2756	0.69	+0.3
2,878,411	+				+0.0
2,878,668	+				+0.1
2,878,685	+				+0.4
2,878,779	+				+0.1
2,878,779	+				-1.2
2,878,779	-				+0.4
2,878,787	-				-0.1
2,878,787	-				-0.5
2,878,787	-				-0.8
2,878,901	+				+0.1
2,878,901	-				-0.2
2,878,927	+				-0.3
2,878,984	+		SO2757	0.11	-1.0
2,878,992	-		SO2757	0.12	-0.2
2,879,059	+		SO2757	0.17	-0.0
2,879,059	+		SO2757	0.17	+0.9
2,879,061	-		SO2757	0.17	+0.3
2,879,063	+		SO2757	0.17	+0.8
2,879,063	+		SO2757	0.17	+0.6
2,879,067	-		SO2757	0.17	+1.1
2,879,096	+		SO2757	0.20	-0.1
2,879,132	-		SO2757	0.22	-0.3
2,879,177	-		SO2757	0.26	-0.1
2,879,279	+		SO2757	0.33	+0.8
2,879,279	+		SO2757	0.33	+0.2
2,879,291	+		SO2757	0.34	+0.0
2,879,291	+		SO2757	0.34	+0.3
2,879,498	-		SO2757	0.50	-0.1
2,879,595	+		SO2757	0.57	+0.3
2,879,624	-		SO2757	0.60	+0.4
2,879,677	+		SO2757	0.64	+2.0
2,879,781	-		SO2757	0.72	-1.0
2,879,940	-		SO2757	0.84	+0.8
2,879,947	-		SO2757	0.84	+0.2
2,880,124	-				-0.8
2,880,303	+				+0.3
2,880,303	+				-0.0
2,880,311	-				+0.6
2,880,351	+				-0.1
2,880,359	-				+0.8
2,880,388	+		SO2758	0.11	+0.8
2,880,401	-		SO2758	0.12	+0.9
2,880,556	-		SO2758	0.23	-0.2
2,880,561	-		SO2758	0.23	-0.2
2,880,600	+		SO2758	0.26	-0.5
2,880,700	-		SO2758	0.33	+0.5
2,880,769	+		SO2758	0.38	-2.0
2,881,036	+		SO2758	0.57	+0.6